Transcript Information: R_Transcript_43739.p1


Annotated TAIR IDAT4G05420.1
Annotated Gene Namedamaged DNA binding protein 1A
Annotated Gene Symbol(s)DDB1A
Annotation TypeOrtholog
Chromosome Positionchr4:2746288-2752663 | Forward length=1088
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.611430354263
Replicate 222.311097648532
Replicate 330.608521238789
Condition 2: 8 Hour
Replicate 126.679685217085
Replicate 232.054905760775
Replicate 338.08690552139
Condition 3: 24 Hour
Replicate 140.762272370577
Replicate 232.169231175659
Replicate 336.690372018498


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43739.p1 GENE.R_Transcript_43739~~R_Transcript_43739.p1 ORF type:complete len:1038 (+),score=226.93,MMS1_N|PF10433.5|3.1e-119,MMS1_N|PF10433.5|2.9e+02,CPSF_A|PF03178.11|1.2e+03,CPSF_A|PF03178.11|4.5e+02,CPSF_A|PF03178.11|4.7e-87 R_Transcript_43739:386-3499(+)
ATGTTGGATGTTCCAATATATGGAAGAATTGCAACTCTAGAACTTTTTCGACCTCATGGTGAAGCACAAGATTTTTTATTCATTGCAACAGAGAGATATAAATTCTGTGTTCTTCAATGGGATCCAGAGACATCAGAGCTTGTCACCAGAGCAATGGGAGATGTTTCTGATCGTATTGGCCGTCCCACTGACAATGGACAGATTGGCATCATTGATCCTGATTGCAGATTGATTGGACTCCACTTATACGATGGATTATTCAAGGTTATCCCATTTGATAATAAAGGACAGCTGAAAGAAGCATTTAATATTAGGCTTGAAGAGCTCCAAGTGCTTGATATAAAGTTTCTCTATGGTTGTTCAAGGCCTACTATCGTAGTTCTTTATCAGGACAACAAGGATGCTCGTCATGTGAAAACATACGAGGTCTCACTGAAGGACAAAGATTTTATTGAGGGGCCATGGTCTCAAAATAATCTTGATAATGGAGCTGACTTGCTTATACCAGTTCCTTCGCCACTCTGTGGTGTTATCATTGTTGGGGAGGAGACCATTGTATACTGCAGTGCAACTGCATTCAAAGCAATTCCTATCAGACCTTCCATAACAAGAGCGTATGGTAGGGTGGATGCTGATGGTTCTCGATATTTGCTTGGTGATCATGCAGGACTCCTGCACCTGCTTGTTATCACCCATGAAAAAGAGAAAGTTACTGGGCTCAAAATTGAGCTCCTTGGAGAAACTTCCATTGCATCAACAATATCATACTTGGATAATGCTTTTGTTTATATCGGTTCGAGCTATGGAGATTCACAGCTCATAAAGTTAAATTTACAGCCAGACACAAAAGGATCATATGTAGAAGTGTTGGAAAGATATGTTAATTTGGGCCCAATTGTAGACTTTTGTGTGGTGGACCTTGAGAGACAAGGTCAAGGCCAAGTTGTTACTTGCTCTGGTGCATACAAGGACGGTTCTCTTCGCATTGTTCGTAATGGCATTGGGATCAATGAACAGGCCTCTGTAGAACTTCAAGGCATCAAGGGAATGTGGTCTTTGAGGTCTTCAACAGATGATGTGTATGACACATTCTTGGTTGTTAGCTTCATCAGTGAGACAAGGATCTTGGCAATGAATCTTGAGGATGAATTGGAAGAGACCGAAATCGAAGGGTTTGATTCTCAAGTGCAGACTTTGTTTTGCCATGATGCTGTGTACAACCAACTCGTGCAAGTCACTTCAAGTTCAGTTAGACTAGTCAGTTCAATATCGAGAGAATTGCGGAATGAGTGGAAAGCCCCATCAGGATTTTCTGTGAATGTTGCTACAACTAATGCCTCCCAGGTTTTGCTGGCCACTGGTGGCGGACATCTTGTTTATCTGGAAATTGGTGATGGAATCCTTACTGAAGTCAAGCATGCACAATTGGACTATGAGATTTCATGTCTTGACATAAACCCTATTGGTGAAAATCCGAATTATAGTCAGCTAGCTGCTGTTGGAATGTGGACTGATATAAGCGTTAGAATATATTCGCTTCCAGATCTTAGTTTGATCACCAAGGAGAATCTTGGAGGAGAAATTATTCCTCGCTCTGTTCTTTTGTGCTCTTTTGAAGGGATAGCTTATCTATTGTGTGCTCTTGGAGACGGCCATCTCTTGAACTTCATATTGAACATGAGCTCTGGTGAACTGACCGACCGAAAGAAGGTGTCTCTGGGTACACAACCTATTACACTCAGGACATTCTCATCCAAGAACACAATACATGTGTTTGCTGCCTCTGATCGGCCAACAGTTATATACAGCAGCAACAAAAAGCTACTATACAGTAATGTGAATCTCAAGGAAGTTAGCCATATGTGCCCTTTCAATTCAGCTGCTTTTCCCGATAGCCTTGCAATTGCCAAAGAAGGAGAACTCACAATCGGAACTATTGATGATATCCAAAAGCTTCATATCCGCTCCATACCTCTCGGCGAGCATGCGCGACGTATATGCCACCAGGAACAAACTCGTTCTTTTGCCATTTGCAGTCTGAAGTACAACCAAGCTAGTGCTGAGGAATCTGAAATGCATTTTGTGCGGTTGTTGGATGATCAAACCTTTGAGATCATATCAACATATGCACTTGATACTTATGAATGTGGTTGTTCGATACAAAGTTGCTCCTTCTCAGATGACAGCAACGTGTATTACTGTGTTGGGACAGCATATGTTTTGCCCGAGGAAAATGAGTCGACCAAGGGAAGGATTCTGATTTTTGTGGTGGAGGATGCAAAGCTGCAGCTCATTGCTGAGAAGGAAACTAAAGGTGCTGTATATTCACTCAATGCTTTCAATGGCAAGCTGTTGGCTGCTATCAATCAAAAGATTCAGCTCTATAAGTGGATGCTTCGAGATGATGGTACACGTGAGTTGCAGTCTGAGTGTGGGCATCATGGGCACATTCTAGCATTGTATGTACAGACTCGAGGTGATTTCATTGTTGTTGGGGACTTAATGAAGTCAATCTCACTGCTAATCTATAAGCACGAAGAAGGTGCTATTGAGGAGCGTGCACGGGATTACAATGCAAATTGGATGTCAGCTGTGGAGATCCTCGACGATGATGTTTACCTTGGGGCTGAAAATAATTTCAATCTGTTCACTGTAAGAAAGAACAGTGAAGGTGCCACTGATGAGGAGCGAGCACGCCTTGAAGTGGTTGGAGAGTACCACCTTGGAGAATTCATCAACCGTTTCCGACACGGTTCTCTTGTCATGCGACTGCCAGATTCAGACATCGGTCAGATACCAACCGTCATCTTTGGGACTGTCAATGGTGTGATTGGGGTTATTGCCTCACTTCCACACGAACAATACGTCTTTCTGGAGAAGCTGCAGTCAAATTTGAGGAAGGTGATAAAAGGTGTGGGAGGATTGAGTCATGAGCATTGGCGGTCATTTTACAACGAGAAGAAAACAGTAGATGCAAGGAACTTCCTTGACGGAGATCTTATTGAATCTTTCCTTGATCTGAGTCGTGGTCGTATGGAGGAGATCTCAAGAACAATGGGAGTTTCAATAGAGGAACTCTGCAAGAGAGTGGAGGAGTTGACTAGATTGCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43739.p1 GENE.R_Transcript_43739~~R_Transcript_43739.p1 ORF type:complete len:1038 (+),score=226.93,MMS1_N|PF10433.5|3.1e-119,MMS1_N|PF10433.5|2.9e+02,CPSF_A|PF03178.11|1.2e+03,CPSF_A|PF03178.11|4.5e+02,CPSF_A|PF03178.11|4.7e-87 R_Transcript_43739:386-3499(+)
MLDVPIYGRIATLELFRPHGEAQDFLFIATERYKFCVLQWDPETSELVTRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSRPTIVVLYQDNKDARHVKTYEVSLKDKDFIEGPWSQNNLDNGADLLIPVPSPLCGVIIVGEETIVYCSATAFKAIPIRPSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAFVYIGSSYGDSQLIKLNLQPDTKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDVYDTFLVVSFISETRILAMNLEDELEETEIEGFDSQVQTLFCHDAVYNQLVQVTSSSVRLVSSISRELRNEWKAPSGFSVNVATTNASQVLLATGGGHLVYLEIGDGILTEVKHAQLDYEISCLDINPIGENPNYSQLAAVGMWTDISVRIYSLPDLSLITKENLGGEIIPRSVLLCSFEGIAYLLCALGDGHLLNFILNMSSGELTDRKKVSLGTQPITLRTFSSKNTIHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQTRSFAICSLKYNQASAEESEMHFVRLLDDQTFEIISTYALDTYECGCSIQSCSFSDDSNVYYCVGTAYVLPEENESTKGRILIFVVEDAKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLGAENNFNLFTVRKNSEGATDEERARLEVVGEYHLGEFINRFRHGSLVMRLPDSDIGQIPTVIFGTVNGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEHWRSFYNEKKTVDARNFLDGDLIESFLDLSRGRMEEISRTMGVSIEELCKRVEELTRLH*

Click here to download the sequence:
Link to NCBI Protein BLAST