Transcript Information: R_Transcript_43774.p1


Annotated TAIR IDAT3G43610.1
Annotated Gene NameSpc97 / Spc98 family of spindle pole body (SBP) component
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:15517772-15523927 | Reverse length=1207
E-Value1.5E-299
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3713768402939
Replicate 22.0330022372168
Replicate 32.6466694374724
Condition 2: 8 Hour
Replicate 12.2314213784308
Replicate 22.7837387483331
Replicate 34.164974934865
Condition 3: 24 Hour
Replicate 13.5865736271108
Replicate 22.3688317115998
Replicate 34.9331930010338


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43774.p1 GENE.R_Transcript_43774~~R_Transcript_43774.p1 ORF type:complete len:1229 (+),score=246.04,Spc97_Spc98|PF04130.9|2.2e-77,Spc97_Spc98|PF04130.9|2.4e+03 R_Transcript_43774:225-3911(+)
ATGGCGGTTGATTTGCATAATTTTGAAGAATCATTGCTTAGAAATTTGAATCTAGAAGAGCCTTGGCTTCCTCCCAAACCTTGGGAGTCCATTCCTTCTGAGAGTGGCCGCTCATTTTCTCTCTCCTCCAAAAATCATACTGCTTCGTCTCGTGATTCTCTCTATGACCTTTCTTCTGTTTCTGAGGCCAGTGTGGTGCGCTTGGTGATGAATGCATTGCAAGGTGTTGAGTCAGCGGTTGTTAGTATTGAGCAGCTCTCAGCGCTATTTTGTGCTGATCCTGCAGATAGATCGACTCATCGAATTCCAACTCTTTGGAATAGATCATTAAGCACTTGTGCATTGGGAAGGATGCTGAAATCTATTGGTTTTTCTGGTTCCTTGGTTGTTCTTCTACAAAAGTTTGTGGACCATTTCACCTATTTTGGTGAGAGTACAGCAACGAAACAACAAGCTGATCATGCAGCAGCAGATGACAATAATAATGAGGGAAGGACAACAGAGCATCCTTTGCACAGTCTTGTGAATCAGGCGTTTGCAGTTGCTGTTCGGAAAGTCTTGGAAGGGTATTTGTGTGCATTAGGTACATTGAAAGCGTCAGTGCATGTGAGGCGTTTGTGCAATAATGTCAATCTGCATTCAAAATATTCACAGTGGCAAGGTAGTCTCACAGACATTGCACATTCTGAAGTTACACTGCTGGAGATTTACCTACACACAAAGGAACCAAGAACCCAAATTGAGGTTCTTGGTCATCTATGCAATTTGCATGATGCAGCTCTTTGCTACTCATTAATTTCTTTTGAGGAATTAACTGCCAAAGCGGTTGTGAAATTCCATGACTTCCCTAGGGGGGCAAGTCTACTCACTTATTTGTACAGACAACTGCAGGTTGTTGATCCAGCTCACTGCACTCTTCTCAAGTACCTTTTTCTGCGGTCACTAGAACCATATTGTGGATTCATTAGGTCCTGGATTTATGAAGCCAAGATAGATGATCCGTATGGCGAATTTATAGTGGGATATTCACATGGTAAAGCTGACATATCTGTTGACTTCCCATTGGCTGCTCTTAGGGAGCAAGATGAAGTTGCTGTTCCTTGTTTTCTGAAAAGTGTCTTAGTTCCATTGCTGAGAGCTGGTCAGCAACTTCAAGTCGTGATGAGATTGCTTCAGCTCTGCAATTATGCTCATGCTGGGGAATACACATTTGAGGATATCGTGCCAGGCTTTAGAGACTTGCCAAGTGGCAAAGTTTCCTGTTCTCCATTAAGCTTTAATAAGGGAGAAATAGTCGCTGCTGGGCTAGCAAGAAGAAGTTTCTACGAGAAGATGCATGAGGAGCTTGAAAACTTTATGGTCAGTCTGCACATCAAGTATCGTCAGGTAGTTTTACATGGTGCAACTACTGTTTATACCAGCAATGGGGAAACTACAGATTTCCAACAGTCATCCCCCTTGGAGGAAACCTTGACATCCATTATGGGCATGGAGGATTTACATCGGGCTCTGCAGAACAAAGATTCAGATGCCTCTAGCATTGATGAGGACGTCTCTTTTCCATCGGACCCTTTAGAGTCTTCTGAATGCTCATCTACAGATGATTTCGAAGATCGAGCAGGTTCAGCAATTTCATTTAAACTTCATGGTAGTTTGGCCAGTTCCAAGCAGAGTCACCTATCTGCTTTGTGCTTCTCTAGTCTATCCTCTGACAAGTGTTTATTAGAATCGCCTCAAACTGAGCAACTTTTGCCTGTGCAACATGACATTACTGATTCTTCAACTAGAGAAACTTCCCTCAGGAATCACGATGCTTCATGCAAAGAATCCATGGATCTCTCAAGATCATGGATATCTGGAATTCAATATGTAGGTTGTGATCCTGATCTTGGATGGCCAGTAGGAGGTCTTCTTGGAAATCCCTTAAGTGCTGGCCAAAAGTCCAGAGATAAAAGAGGTTTTCAAGTTACTGGCAGTGATATGATCGCATCTAGTGGTCAAGTCTTGGAGGAAGTTCTTTCATGTTCTAGTGACCAATCTGCATGTGGGGGTGCAGTGATGCATGAACTATCTGAGGGTTCTGAATGTTCCTCTTCGAATTCATTTCTTATACAATCATGGAATGCAAAATACCCATGCAATGTGCTTAGTATGAACCCTATGTTCACTAGAAGTGCTTTTCTGAATGATGTGAGCCAACCTGGGGAGAACAAATCAAAATTCAGCAAAAGTTTCCCATGCTTTGATTTTTCATCCACCAGAGATCCTTTTAAGGTTGATGAAGGGATGTTAGGGGATGGTCAAGAGAGTCATATTAGGCCCGAATCTTCTCGGTTAAATGGAATTTTTGCTGTTCGCTCTACAGAATTTTGTGGAACAGCACATTATGATGCCGGTGATGTTCCCCTAGATAAGAACTATATGGATCATGGGGGCACTTGTTTGAATGTAAGGAGTGAAAGCATAGATGCTCATTTGCAAAAATCCATGGGTGGAAGCAGTTGGCAGAGTTTGCTGCATGACTCTTTCAGCACTGGGAATGCTACTACAACAGAGAGTGAGCATAGCTCCGAGTCTGTATTCCCGATACCCCTTGATTTCATTATTGACAACTGCCTGTTGCAGGAAATTTTGCTACAATACATATATGTAAGCAGGTTGAGTATCAAGTTGCTAGAAGAAGGATTTGAGTTGCGGGAGCACTTTCTTGCATTGCGACGGTATCATTTTATGGAAGTAGCAGACTGGGCAGATCTATTTATCACATCTCTTTGGCATCATAAATGGCATTTCATGAAGGCAGATCAAAAAATCCCCAAAATTCAAGGGCTACTTGAGTCATCAATCCAGAGGTCTTCATGTGAGAGGGACTGTAATAAGGATCGCCTGTATGTTTATGTTAAGGATCAGGAGAGGACTCCTTTATCAATTACTCAAGTTGGGATCCATTCCTTCGATTTTATAGGACTTGGTTATAGAGTGGATTGGCCTGTCAGTATTGTCTTGACCCCAAATTCATTGAGAATGTATGCTGAGATATTCAACTTTCTCATACAAGTCAAGCTTGCTGTTCTATCTTTATCTGATGTGTGGTCTTCACTAAAGGGGTTTAGGCATGGTATCAGTCAGAGTAGTCAACAACCTGAAATGGCAAGAATCAATTTCAATTACTTAGTGAAATTGAGGCATCAGGTTAATCATTTCGTGTTCACACTGCAGCAATATGTTCTATCACAGTTATCACACGTGTCATGGTGCAAATTCCTCTACGCCCTCAAGCATGAGGTAAAAGACATGATGGACCTCGAGTCAGTGCATATGGCTTACCTAACTGAGTCAAAGCACATATGCTTCCTAGCTGATGAAACACAAGCCATATCAAACAACATTGAGAGTGTTTTGCAGTGTGCATTAGATTTTCGGTCATGCCTTGTCAAGGGTATTGAAGACGATAGATCAAATGACAAGATTTCAGTTGGTAGTATTTTACAGATCAATGTTTCTCAGGTTCTTTCCCTCAAGGAGAAATTTTACAAGAATCTGAAAGAATTGCAGTTATTATATCTCAAGTCTCCCAAGCATGGGGAGTTTGGTCTTCCTCGTTTTTGGAGCTACCTGAATTATAATGAGTACTACTCAGATACTTTTGACAGTGAAATCTGCCATTACAACCTTTTGGTACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43774.p1 GENE.R_Transcript_43774~~R_Transcript_43774.p1 ORF type:complete len:1229 (+),score=246.04,Spc97_Spc98|PF04130.9|2.2e-77,Spc97_Spc98|PF04130.9|2.4e+03 R_Transcript_43774:225-3911(+)
MAVDLHNFEESLLRNLNLEEPWLPPKPWESIPSESGRSFSLSSKNHTASSRDSLYDLSSVSEASVVRLVMNALQGVESAVVSIEQLSALFCADPADRSTHRIPTLWNRSLSTCALGRMLKSIGFSGSLVVLLQKFVDHFTYFGESTATKQQADHAAADDNNNEGRTTEHPLHSLVNQAFAVAVRKVLEGYLCALGTLKASVHVRRLCNNVNLHSKYSQWQGSLTDIAHSEVTLLEIYLHTKEPRTQIEVLGHLCNLHDAALCYSLISFEELTAKAVVKFHDFPRGASLLTYLYRQLQVVDPAHCTLLKYLFLRSLEPYCGFIRSWIYEAKIDDPYGEFIVGYSHGKADISVDFPLAALREQDEVAVPCFLKSVLVPLLRAGQQLQVVMRLLQLCNYAHAGEYTFEDIVPGFRDLPSGKVSCSPLSFNKGEIVAAGLARRSFYEKMHEELENFMVSLHIKYRQVVLHGATTVYTSNGETTDFQQSSPLEETLTSIMGMEDLHRALQNKDSDASSIDEDVSFPSDPLESSECSSTDDFEDRAGSAISFKLHGSLASSKQSHLSALCFSSLSSDKCLLESPQTEQLLPVQHDITDSSTRETSLRNHDASCKESMDLSRSWISGIQYVGCDPDLGWPVGGLLGNPLSAGQKSRDKRGFQVTGSDMIASSGQVLEEVLSCSSDQSACGGAVMHELSEGSECSSSNSFLIQSWNAKYPCNVLSMNPMFTRSAFLNDVSQPGENKSKFSKSFPCFDFSSTRDPFKVDEGMLGDGQESHIRPESSRLNGIFAVRSTEFCGTAHYDAGDVPLDKNYMDHGGTCLNVRSESIDAHLQKSMGGSSWQSLLHDSFSTGNATTTESEHSSESVFPIPLDFIIDNCLLQEILLQYIYVSRLSIKLLEEGFELREHFLALRRYHFMEVADWADLFITSLWHHKWHFMKADQKIPKIQGLLESSIQRSSCERDCNKDRLYVYVKDQERTPLSITQVGIHSFDFIGLGYRVDWPVSIVLTPNSLRMYAEIFNFLIQVKLAVLSLSDVWSSLKGFRHGISQSSQQPEMARINFNYLVKLRHQVNHFVFTLQQYVLSQLSHVSWCKFLYALKHEVKDMMDLESVHMAYLTESKHICFLADETQAISNNIESVLQCALDFRSCLVKGIEDDRSNDKISVGSILQINVSQVLSLKEKFYKNLKELQLLYLKSPKHGEFGLPRFWSYLNYNEYYSDTFDSEICHYNLLVH*

Click here to download the sequence:
Link to NCBI Protein BLAST