Transcript Information: R_Transcript_437892.p1


Annotated TAIR IDAT1G70310.1
Annotated Gene Namespermidine synthase 2
Annotated Gene Symbol(s)SPDS2
Annotation TypeHomolog
Chromosome Positionchr1:26485497-26487352 | Reverse length=340
E-Value3E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13372132567559
Replicate 20.076909525334425
Replicate 30.25172239116651
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.066489416191894
Condition 3: 24 Hour
Replicate 10.16818906393922
Replicate 20.080788494104679
Replicate 30.40087371221424


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_437892.p1 GENE.R_Transcript_437892~~R_Transcript_437892.p1 ORF type:5prime_partial len:273 (+),score=-3.87,Spermine_synth|PF01564.13|2e-54 R_Transcript_437892:3-821(+)
GAGCACGTCCTCATCATCGGCGGCGGTGATGGCGGTGTCATCCGCGAGGTCGTCAAGCACTCGTGCGTCAAGTCGATCACCATCTGCGAGATTGACAAGCTTGTCATCCAGGCCGGCAAGACCTACTTCCCGTCGGTCGCTGCCGCGTGGGACGATGCGCGCGTCAAGCTTCACTGCGGCGATGGTACCGTCTTCATCAACGCCGAGGAGAACAAGAACAAGTACGATGTCATCATCACCGACTCGTCGGACCCGGTCGGCCCGGCCGCTGCGCTCTTCGAGTCGCCGTTCTACATCTCGATGCACGAGGCGCTCCGCGAGGGCGGCAAGGTTTGCACCCAGGCTGAGTCGATGTGGCTCCACCTGGACCTCATTGGCAAGCTCGTGAAGGACTCGTCGCACACGTTCGCGAACGCTGAGTACGCCACCACTCAGATCCCGACCTACCCGGCCGGCCAGATTGGTCTTCTCCTCTGCTCGAAGCAGACCACTGGTCGCAAGGTGCCGTCCTGCATCAAGCCGGCGCGCATGGTGAAGGAGGCGGATGCGGACAACTTCAAGTACTACTCGTCTGCGCTCCACACGGCTTCGTTCACGCTCCCGCGTTTCGTCGCGAAGAAGTGCGAGGAGGCGCGTGCGACCGCCCTCTCCGAGAAGAAGGGTCTCGCTGCGGCGAAGAAGCCGGCGGCGAAGCGCAAGTCGGCCGGCAAGGCAAAGAAGGCCGCTGCCGAGGAGGAGGAGGATGAGGAGGCTGCCGATGAGCCGGCTGCCAAGGCCGCCAAGACCGACGACGCGGCGGAGACCGCTGCCGACGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_437892.p1 GENE.R_Transcript_437892~~R_Transcript_437892.p1 ORF type:5prime_partial len:273 (+),score=-3.87,Spermine_synth|PF01564.13|2e-54 R_Transcript_437892:3-821(+)
EHVLIIGGGDGGVIREVVKHSCVKSITICEIDKLVIQAGKTYFPSVAAAWDDARVKLHCGDGTVFINAEENKNKYDVIITDSSDPVGPAAALFESPFYISMHEALREGGKVCTQAESMWLHLDLIGKLVKDSSHTFANAEYATTQIPTYPAGQIGLLLCSKQTTGRKVPSCIKPARMVKEADADNFKYYSSALHTASFTLPRFVAKKCEEARATALSEKKGLAAAKKPAAKRKSAGKAKKAAAEEEEDEEAADEPAAKAAKTDDAAETAADE*

Click here to download the sequence:
Link to NCBI Protein BLAST