Transcript Information: R_Transcript_43820.p1


Annotated TAIR IDAT4G01960.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:851387-852441 | Reverse length=236
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.742628061892
Replicate 22.843249014707
Replicate 39.4251680734169
Condition 2: 8 Hour
Replicate 17.2692411562134
Replicate 29.8993487317749
Replicate 312.006534108277
Condition 3: 24 Hour
Replicate 17.8917462345233
Replicate 25.3989435825892
Replicate 34.6739369383479


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43820.p1 GENE.R_Transcript_43820~~R_Transcript_43820.p1 ORF type:complete len:192 (+),score=41.99 R_Transcript_43820:597-1172(+)
ATGGCTTCTCGAGAAGGAGAGTTTTTGGGTGATCTTGAATGTGGCGGGTCTACCTCGGAGGATGAGGGAAGTAAGGAACCTGTATCTAGTACTAGCAAAGGGAGAAAAGTGCTAACTAGGGGTCGCAGTGGTGCTTTATTTGTTTGTAATGGATCAGTAAGCAGTGAGAGTGATACAGACTCGAGCGATGGCTTCCCAAAATCAGGCACTGCTGGCCAAAGAGTGGAGTTATTGATTGATAGGAGTTCAGGAAGTGAAGAATGCACAGACCTTGTGGCTCTTTTGGATAAGAGGGGTCCTACTGATCAATGTAAGAAGCCGTGCTCAAAAAAGGCTTCCAAGCCACCACGACCTCCTAAAGGTCCACTATTGAACGCTGCTGACTTGAAGTTGGTGAGGGAGCTCTCGGAACTTGCTGCAAGGAAGCGAGCCAGGATTGAGAGGATGAGAGCATTGAGGAAAATGAAGGAGGCCAAGAGGACATCCAGCTCAAGTAACAGCCTGACTGCTATGGTCATTACTATTATCTTCTTCCTGATCGTAATACTTCAAGGTTATCTAAGTCCTCATATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43820.p1 GENE.R_Transcript_43820~~R_Transcript_43820.p1 ORF type:complete len:192 (+),score=41.99 R_Transcript_43820:597-1172(+)
MASREGEFLGDLECGGSTSEDEGSKEPVSSTSKGRKVLTRGRSGALFVCNGSVSSESDTDSSDGFPKSGTAGQRVELLIDRSSGSEECTDLVALLDKRGPTDQCKKPCSKKASKPPRPPKGPLLNAADLKLVRELSELAARKRARIERMRALRKMKEAKRTSSSSNSLTAMVITIIFFLIVILQGYLSPHI*

Click here to download the sequence:
Link to NCBI Protein BLAST