Transcript Information: R_Transcript_43833.p3


Annotated TAIR IDAT5G41960.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16789760-16790868 | Forward length=217
E-Value1.8E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1684011305476
Replicate 24.1390556376215
Replicate 35.6651071474355
Condition 2: 8 Hour
Replicate 14.7391996672087
Replicate 25.4499640329771
Replicate 35.855358264641
Condition 3: 24 Hour
Replicate 16.5005977454789
Replicate 25.1383219637546
Replicate 36.7467476812658


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43833.p3 GENE.R_Transcript_43833~~R_Transcript_43833.p3 ORF type:complete len:279 (+),score=43.51 R_Transcript_43833:5175-6011(+)
ATGATTCCTTTGAATTTGAGTATCACTACTACTCCAACTTCAGTCACAAGGCTCCATTCCCCTCCCCCTTTTGTACTTGCCCCTTATTCTTCTAAGCAACTCAAACCTACACCACCTACCCTCGCAACCCATAATGTCAGAACGCTGCTAATTCATCAGCTGAGAGGAATTGCAACTGGAAGAACAGTAAGAGGAAGAGGTGTACTGATATGTCGGGCGGAGTTTTCTCAAGACGCTCCTTTTGCCGTAGCCATAGGCGCGTGTATGCTCAACTCCCTCATATTTCCCTACACCGGCGACAAAGATGACGATGGTGATGAAGATGAAGAGTCGCCGGCGATGGGCGCCAGCGACGCCAGGTTTGCGGTTATGACCATCATTAGCTTCATCCCTTACTTCAATTGGCTGAGCTGGGTTTTTGCTTTGACTGATACGAGCAAGCTTAGATATGCTGTTTACGCTGCTGTTTATTTGGCCCCTTACCTCAGGACAAATCTATCACTTGCTCCAGAGGAGAGTTGGCTACCAATTGCAAGTATTGTTCTCTGCATTATTCATATACAGCTGGAAGCAAGTATTAGAAGTGGTGATCTCAATGCCTTGGCCTTCTTGAATGAGACTGCTCAGCGTTTTGGTTTGGTTGGTAAAAGTAAAGACAATCACTCTAAAAGACAAGGAAAAATGCATGAGGCGAGGAGACACAACAACATGAATCTACTCCAGGGACAAACACAATCAAGGGATGAGATTGAAAGATGGAAAATTTCTAGAGAGCCTTCCCGAGAGCTTGAAAATTTGAATGAAGACAATGACAAGTACGATGAAATGGAGCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43833.p3 GENE.R_Transcript_43833~~R_Transcript_43833.p3 ORF type:complete len:279 (+),score=43.51 R_Transcript_43833:5175-6011(+)
MIPLNLSITTTPTSVTRLHSPPPFVLAPYSSKQLKPTPPTLATHNVRTLLIHQLRGIATGRTVRGRGVLICRAEFSQDAPFAVAIGACMLNSLIFPYTGDKDDDGDEDEESPAMGASDARFAVMTIISFIPYFNWLSWVFALTDTSKLRYAVYAAVYLAPYLRTNLSLAPEESWLPIASIVLCIIHIQLEASIRSGDLNALAFLNETAQRFGLVGKSKDNHSKRQGKMHEARRHNNMNLLQGQTQSRDEIERWKISREPSRELENLNEDNDKYDEMEH*

Click here to download the sequence:
Link to NCBI Protein BLAST