Transcript Information: R_Transcript_43839.p1


Annotated TAIR IDAT5G20300.1
Annotated Gene NameAvirulence induced gene (AIG1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6853544-6856332 | Reverse length=793
E-Value1.1E-276
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4009610932198
Replicate 26.2883656635279
Replicate 38.3819140076147
Condition 2: 8 Hour
Replicate 17.6710103218187
Replicate 27.2014368836901
Replicate 39.4397473777702
Condition 3: 24 Hour
Replicate 19.2924457826421
Replicate 27.2964766254541
Replicate 38.9964500467448


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43839.p1 GENE.R_Transcript_43839~~R_Transcript_43839.p1 ORF type:complete len:798 (+),score=156.59,TOC159_MAD|PF11886.4|8.6e-111,AIG1|PF04548.12|4.3e-25,MMR_HSR1|PF01926.19|3.3e-11,DUF258|PF03193.12|9.9e-06,Septin|PF00735.14|1.6e-05 R_Transcript_43839:454-2847(+)
ATGAAGAGCATCAGGGACTGGGTTTTTGCACAACTAGTGTCTGGTTCATTGATCTTGCCAAGTCCGTTGTCAAGCAGTGACAGTTGCTTGGAAGAGGAGCGTCAAAATGAGGAGTTTGCCTCAGGTTCAACACTAACTGCTGGTGGAGTGGCATCACAAGCGCATCCAGATACAACACGGTCTTCTAGCAGTCAAGAAGGCCCAATAGGTCCCACTTTGCAGCAAGTTCGTGATGTGGATACCACTTCCCATTATGACTCTACTGGTCAGAAGAAGTTGGATCCGTTGTCAGAAATTGAGGCCCTTCAGATTAAGTTTTTCCGTACTCTACAACGGCTTGGACAATCACCAGAAGATATTGTTGTTGCTAAGGTCCTATACCGGATGCATTTAGCAACATTAGTCAGAGCAGGGGAGTCAGATTTGAAAAGGATTAATCTCAGAAGTGATAAAACCAGAGCTTTAGCAGCACAACAGGAAGCCGCTGGCCTCCCGATAGGGGACTTTTCTCTGAGGATACTCGTCTTGGGGAAGACTGGTGTTGGTAAGAGTGCAACCATCAACTCACTTTTTAATCAGAAGAAGGCTCTCACTAATGCTTTTCGGCCTGCTACTAAGCGCGTTCAAGAAGTTACCGGAGATGTGAATGGTGTTAAAATTACAGTTGTTGATACTCCTGGTTTCCTGCCTTCCTACGCAAGCAATGTACGAAGGAACAGGAAGATTATGCTTTCTATCAAAAAGTATGTTCAAAGATATCCACCAGATGTTGTTTTGTATGTTGAACGTCTGGATACCATGGCCAAGGGTTACAATGACTTCCCTCTCTTGAGGCTTATAACTGAGGTTTTTGGGTCTGCAATATGGTTCAACACTATTCTTGTCATGACGCATGCTGCAGCCGCACTTCCCGAGGGACCCAATGGGTTTCCCATTGCGTACGAGTCTTATGTTCACTATTCCACAGATGTGTTACAACGTTATGTACAGATAGCTATATCTGATGCAAAACTTGAGAACCCTGTAGTTTTGGCTGACAACCATCCGAAGTGTAGGACTAACATCACCGGTGAGAAAATTCTCCCAAATGGACAGGTCTGGCGACAACTGTTGCTGTTATTGTGCTTGTGCACAAAGGTACTCGGTGATGCCAATGCTCTGCTGGGACTCCAAGGCAGCATTGAACTTGGGCCATCTAGCAACTCTCGGCTGGCTTCGCTTCCTCATCTGCTTTCATCTTTTCTACGGCAGCGCTCTGTAGTGACTTCAGATGGAAGAGATGAGGCTGATGAGTATTGTCTTTTAGATGGTGAATCAGATGAGGAAGAATACGATCAACTGCCTCCAATTCGCATTCTGACAAAGATGCAGTATGAGAAATTGAGCAATGATCAGAAAAGATATTATCTTGATGAGCTGGATTATCGAGAAACACTGTTTTTGAAGAAGCAACTGAAGGAGGAATTACGTAAGAGGAGAGAAAGACAGATGTTTGAGGGGGAAAACTTTTTGAGTGAGGGTAGTGTTGATGGTCCAGAAGCATTTCCAGAGGCCGCTCCACTACCTGATATGGCAATCCCTCCAACTTTTGACTCCGATTCTCCTGTACATAGGTATAGAGGGGTAGTCACGAGTGACCAGTGGCTTTGGAGACCTCTGGTAGATCCCCATGGATGGGACCATGATATAGGTTATGATGGAGTAAACCTGGAAACAGCTTTTGAACTCAAAAGGAACTTGACTGCCTCGATCTCAGGACAGATGAGCAAGGACAAGCATGATTTGAGTATTCACTCTGAGTGCAACGCAGCTTATGCAGATCCCAAGGGCCCCGTCTACTCTGCAGGTCTTGACATTCAATCTTCTGGTAAGGATATGGTGTACACTCTCCACAGCCATGCAAATTCGAGGAACTTGAAGCATAACGTCACAGGATGTGGAATTTCGGTGACAACATTCCAGAAGAAGTGTTACATTGGTGCTAAGGTTGAAGATACCCTTCATGTAGGAAAGAGGCTTAAGTTTGCGATGAATGCTGGTCGATTGGGAGGTAGTGGGCAGGCCGCGTATGGTGGGAGCCTCGAAGCAACTGTACGAGGGAGAGACTACCCTGTGAGGAATGATAAGTTCAGCATGGCAATGACAGTTCTGTCTTTCAATAAAGATTTGGTTCTAGGTGCAAATGTTGAGTCCGAGTTCCGACCAATTCGGAGTCTGAGAGTGGCAGTTAATGCAAACCTAAATAGCCGAAATATGGGGCAAGTTTCTATCAGAACAAGCAGTTCTGAGCATGTGGAAATATGTGCCATTGCACTTTTCACTATTCTGAGGGCTCTTTTCCGGAGAAGGGAACCCGGTTCTCCTCCTCCTATTGAGGCTCAGGACGTGGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43839.p1 GENE.R_Transcript_43839~~R_Transcript_43839.p1 ORF type:complete len:798 (+),score=156.59,TOC159_MAD|PF11886.4|8.6e-111,AIG1|PF04548.12|4.3e-25,MMR_HSR1|PF01926.19|3.3e-11,DUF258|PF03193.12|9.9e-06,Septin|PF00735.14|1.6e-05 R_Transcript_43839:454-2847(+)
MKSIRDWVFAQLVSGSLILPSPLSSSDSCLEEERQNEEFASGSTLTAGGVASQAHPDTTRSSSSQEGPIGPTLQQVRDVDTTSHYDSTGQKKLDPLSEIEALQIKFFRTLQRLGQSPEDIVVAKVLYRMHLATLVRAGESDLKRINLRSDKTRALAAQQEAAGLPIGDFSLRILVLGKTGVGKSATINSLFNQKKALTNAFRPATKRVQEVTGDVNGVKITVVDTPGFLPSYASNVRRNRKIMLSIKKYVQRYPPDVVLYVERLDTMAKGYNDFPLLRLITEVFGSAIWFNTILVMTHAAAALPEGPNGFPIAYESYVHYSTDVLQRYVQIAISDAKLENPVVLADNHPKCRTNITGEKILPNGQVWRQLLLLLCLCTKVLGDANALLGLQGSIELGPSSNSRLASLPHLLSSFLRQRSVVTSDGRDEADEYCLLDGESDEEEYDQLPPIRILTKMQYEKLSNDQKRYYLDELDYRETLFLKKQLKEELRKRRERQMFEGENFLSEGSVDGPEAFPEAAPLPDMAIPPTFDSDSPVHRYRGVVTSDQWLWRPLVDPHGWDHDIGYDGVNLETAFELKRNLTASISGQMSKDKHDLSIHSECNAAYADPKGPVYSAGLDIQSSGKDMVYTLHSHANSRNLKHNVTGCGISVTTFQKKCYIGAKVEDTLHVGKRLKFAMNAGRLGGSGQAAYGGSLEATVRGRDYPVRNDKFSMAMTVLSFNKDLVLGANVESEFRPIRSLRVAVNANLNSRNMGQVSIRTSSSEHVEICAIALFTILRALFRRREPGSPPPIEAQDVG*

Click here to download the sequence:
Link to NCBI Protein BLAST