Transcript Information: R_Transcript_438595.p1


Annotated TAIR IDAT3G61490.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22758439-22760137 | Forward length=476
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44884330216522
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_438595.p1 GENE.R_Transcript_438595~~R_Transcript_438595.p1 ORF type:internal len:122 (+),score=-26.34,Pectate_lyase_3|PF12708.3|1.2e-16 R_Transcript_438595:3-365(+)
CGAATGCGGTGGCCGGTGCTGCTGGTGGCGCTCGTGGCGGGCGTGGCCGCGCAGACCTATAACGTCGTCAAGTACGGCGCGGTGGGCGATGGCCGAACCGATTGCACAGCAGCCTTCACGGCGGCCATCGCAGCTGCCAGCGCGGCCGGAGGCGGAACCATCCTTGTGCCCAACGGCGCCTTCCTGATCGGGTCGATCTCACTGCCGTCGCACACGTACCTCTTTCTCTCGCCCAAGTCGTGGCTCCTCGGCCTCCAGGACGTGTCGAAGTGGCCCACGGTCCCCGCGATGCCCTCCTATCCCATAAGCTCTCTGAAGAACTCGTCGCCCCGCCTCCGGCCTTGGATCTCCATTGAGAACGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_438595.p1 GENE.R_Transcript_438595~~R_Transcript_438595.p1 ORF type:internal len:122 (+),score=-26.34,Pectate_lyase_3|PF12708.3|1.2e-16 R_Transcript_438595:3-365(+)
RMRWPVLLVALVAGVAAQTYNVVKYGAVGDGRTDCTAAFTAAIAAASAAGGGTILVPNGAFLIGSISLPSHTYLFLSPKSWLLGLQDVSKWPTVPAMPSYPISSLKNSSPRLRPWISIENA

Click here to download the sequence:
Link to NCBI Protein BLAST