Transcript Information: R_Transcript_43917.p1


Annotated TAIR IDAT1G15170.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5220690-5222756 | Forward length=481
E-Value2.8E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1424629822813
Replicate 22.2822065669889
Replicate 34.2683361980408
Condition 2: 8 Hour
Replicate 13.0417223536951
Replicate 22.7777492970417
Replicate 36.2008607709397
Condition 3: 24 Hour
Replicate 15.3473153480677
Replicate 24.1096755696728
Replicate 37.0693207684389


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43917.p1 GENE.R_Transcript_43917~~R_Transcript_43917.p1 ORF type:complete len:322 (+),score=39.29,MatE|PF01554.14|7.2e-34,MatE|PF01554.14|3.5e+02,MatE|PF01554.14|0.00085 R_Transcript_43917:125-1090(+)
ATGGAAGAGAGGTTGTTAGTGAAGGAGGAGGAATCAGAAATTAGATCATGGAGAGTAATAGGAAGGGAGGTGAAGAGGGTAAGTTGGTTGGCATGTCCAATGGTGGGAGTAATGTTATCTCAATACCTTCTGCAAGTCATTTCCAATATGATGGTTGGTCATCTTGGTAAGCTCGCTCTCTCCAGCAGTGCCATCGCCATTTCCCTTGCTGGGGTCACCGGCTTTAGCTTCATGCTAGGAATGGCAAGTGCATTGGAGACTCTAAGTGGGCAAGCATATGGAGCAAAACAATACAAGAAACTAGGAACACAAACATACACTGCAATTTTCTGCCTAACATTAGTATGCATTCCTCTCTCCATATTGTGGATATACATGGGAAAATTGCTGGTTTTTGTTGGCCAAGACCCTTTAATTTCACATGAAGCAGGTAGATATGCAACATACCTTATACCAGCCCTCTTTGCTCATGCATCTCTTCAACCACTTACTCGATACTTTCAATCCCAAAGTTTGATTAAGCCTATGGTTTTATGTTCTTTTACCACTCTTTGCCTCCATATACCAATTTGTTGGGTTTTGGTATTCAAATCGGGGCTCCGAAACATTGGAGCTGCTATCGCTATGAGCATATCCATGTGGTTGAATGTGTTTTTCCTGTCTGTGTACATGAAATTCTCTTCTGCTTGTGCACTGACTCGTTCTCCCTTCTCCATGGAAGTTTTTCATGGAGTTGGGGAGTTTTTCCGCTTCGCAATTCCTTCTGCCATTATGATCTGTTTAGAATGGTGGTCGTTTGAGCTGCTGATTTTACTATCAGGGCTTCTACCACATCCAGAACTCGAGACTTCTGTTCTTTCTGTGTGCTTGACAAGTATTTCAACACTCTATGCAATACCTTATGGAGTGGGAGCTGCTGGAAGGAGTGTGCTCTATACCAAAATTAAAATGACAGTCAGGTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43917.p1 GENE.R_Transcript_43917~~R_Transcript_43917.p1 ORF type:complete len:322 (+),score=39.29,MatE|PF01554.14|7.2e-34,MatE|PF01554.14|3.5e+02,MatE|PF01554.14|0.00085 R_Transcript_43917:125-1090(+)
MEERLLVKEEESEIRSWRVIGREVKRVSWLACPMVGVMLSQYLLQVISNMMVGHLGKLALSSSAIAISLAGVTGFSFMLGMASALETLSGQAYGAKQYKKLGTQTYTAIFCLTLVCIPLSILWIYMGKLLVFVGQDPLISHEAGRYATYLIPALFAHASLQPLTRYFQSQSLIKPMVLCSFTTLCLHIPICWVLVFKSGLRNIGAAIAMSISMWLNVFFLSVYMKFSSACALTRSPFSMEVFHGVGEFFRFAIPSAIMICLEWWSFELLILLSGLLPHPELETSVLSVCLTSISTLYAIPYGVGAAGRSVLYTKIKMTVRL*

Click here to download the sequence:
Link to NCBI Protein BLAST