Transcript Information: R_Transcript_43917.p2


Annotated TAIR IDAT1G15170.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5220690-5222756 | Forward length=481
E-Value7.9E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1611273161803
Replicate 23.5189330306645
Replicate 32.175500218629
Condition 2: 8 Hour
Replicate 15.4717016641889
Replicate 27.7451099114721
Replicate 39.5321307168513
Condition 3: 24 Hour
Replicate 17.4388425654013
Replicate 26.5303280514
Replicate 36.1138839907534


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43917.p2 GENE.R_Transcript_43917~~R_Transcript_43917.p2 ORF type:complete len:179 (+),score=6.82,MatE|PF01554.14|9.7e-19,MatE|PF01554.14|1.7e+03 R_Transcript_43917:1095-1631(+)
ATGCTTTTGATTATGTTCATCGCTAAATACAGCACAAGAGTCTCCAATGAAATCGGGGCAGGAAACCCACGAGGTGCTCGTGTGGCAGCCAGCGGAGTGATGGTAATTGCAACGGCAAATGGCCTTGTTGTAAGCGCTCTTCTCTTTGGTACTAGAAAAATTTTCGGCTACATTTTTAGTAGCGACAAGGAGGTTGTAGATTATGTCACCAAAATGGCGCCTTTGGTTTGTGTCAGTACTATGATGGACAGCTTACAAGGTGTTCTTTCAGGTGTGGCTAGAGGATGCGGATGGCAACACGTAGGTGCTTTTGTGAATCTGGGTGCATTCTATCTTGTCGGAATTCCGCTTGGAGCTATTTTAGGCTTCTGGTTGCAAATGAGGGGAATAGGCCTCTGGATTGGTGTTGTCGCTGGTGCCACTATACAGACATTCCTTCTAGCTATCATAACTAGTTCCACTAACTGGGAACAACTGGTTTGTCTGCATTTCCCAATATTTCTATTTTCAGTTACATTCAGTACTACTTACCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43917.p2 GENE.R_Transcript_43917~~R_Transcript_43917.p2 ORF type:complete len:179 (+),score=6.82,MatE|PF01554.14|9.7e-19,MatE|PF01554.14|1.7e+03 R_Transcript_43917:1095-1631(+)
MLLIMFIAKYSTRVSNEIGAGNPRGARVAASGVMVIATANGLVVSALLFGTRKIFGYIFSSDKEVVDYVTKMAPLVCVSTMMDSLQGVLSGVARGCGWQHVGAFVNLGAFYLVGIPLGAILGFWLQMRGIGLWIGVVAGATIQTFLLAIITSSTNWEQLVCLHFPIFLFSVTFSTTYL*

Click here to download the sequence:
Link to NCBI Protein BLAST