Transcript Information: R_Transcript_43919.p1


Annotated TAIR IDAT1G15170.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5220690-5222756 | Forward length=481
E-Value4E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6259001293299
Replicate 23.1126590913649
Replicate 35.0012014697799
Condition 2: 8 Hour
Replicate 12.3099872591741
Replicate 23.5560432038543
Replicate 37.5346308235569
Condition 3: 24 Hour
Replicate 14.7029470331685
Replicate 25.5286767569372
Replicate 36.6076089620822


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43919.p1 GENE.R_Transcript_43919~~R_Transcript_43919.p1 ORF type:3prime_partial len:371 (+),score=60.92,MatE|PF01554.14|6.6e-32,MatE|PF01554.14|6.8e+03,MatE|PF01554.14|9.2e-15 R_Transcript_43919:173-1282(+)
ATGGAGGAAGGGCTTTTGAGAATGAAAGATGAGGAATTAAGATCATCAACATCAACATGTTCATCTGTACCAAAAAAAACATCAACATGTTCATGGAGAAGCATAGGAGGAGAAGTGAAGAGGGTGAGTTGGTTAGCAGGACCAATGGTAGCAGTAGTTATGTCCCAATACTTTCTTCAAGTAAGTTGCACCATGATGGTTGGTCATCTTGGCCAGCTTGCTCTTTCCAGTACTGCCATTTCTGTCTCCCTTTCTAGCGTCACTGGCTTTAGCCTTATGCTAGGAATGGCAAGTGCATTGGAGACTCTAAGTGGGCAAGCATATGGAGCAAAACAATACAAGAAACTAGGAACACAAACATACACTGCAATTTTCTGCCTAACATTAGTATGCATTCCTCTCTCCATATTGTGGATATACATGGGAAAATTGCTGGTTTTTGTTGGCCAAGACCCTTTAATTTCACATGAAGCAGGTAGATATGCAACATACCTTATACCAGCCCTCTTTGCTCATGCATCTCTTCAACCACTTACTCGATACTTTCAATCCCAAAGTTTGATTAAGCCTATGGTTTTATGTTCTTTTACCACTCTTTGCCTCCATATACCAATTTGTTGGGTTTTGGTATTCAAATCGGGGCTCCGAAACATTGGAGCTGCTATCGCTACGGGCATATCATTGTGGTCCAATGTCATTTTGCTTTCTCTGTACATGAAGTTCTCTTCTGCTTGTGCAATGACTCGTTCTTCACTTTCCTTGGAAATTTTTCATGGTGTTTGGGAGTTCTTTCGCTATGCCATTCCTTCTGCTGTAATGATTTGCTTGGAGTGGTGGTCATTTGAGCTGGTGATTTTGTTATCAGGGCTTTTGCCACATCCAGAACTCGAGACTTCTGTTCTTTCTGTGTGTTTGACAATTATTGCAACATTGTATTCTATACCAGTTGGAGTTGGAGCTGCTACAAGCATAAGAGTCTCCAATGAACTTGGGGCAGGAAACCCACGAGGTGCTCAAGTAGCAGTTTGTGGGGCTACAATAATTGCAGTAGCAAATGGTCTTGTTGTAAGCTCAATCCTCCTTTCTACGAGGAAAGTTTTTGGCTATGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43919.p1 GENE.R_Transcript_43919~~R_Transcript_43919.p1 ORF type:3prime_partial len:371 (+),score=60.92,MatE|PF01554.14|6.6e-32,MatE|PF01554.14|6.8e+03,MatE|PF01554.14|9.2e-15 R_Transcript_43919:173-1282(+)
MEEGLLRMKDEELRSSTSTCSSVPKKTSTCSWRSIGGEVKRVSWLAGPMVAVVMSQYFLQVSCTMMVGHLGQLALSSTAISVSLSSVTGFSLMLGMASALETLSGQAYGAKQYKKLGTQTYTAIFCLTLVCIPLSILWIYMGKLLVFVGQDPLISHEAGRYATYLIPALFAHASLQPLTRYFQSQSLIKPMVLCSFTTLCLHIPICWVLVFKSGLRNIGAAIATGISLWSNVILLSLYMKFSSACAMTRSSLSLEIFHGVWEFFRYAIPSAVMICLEWWSFELVILLSGLLPHPELETSVLSVCLTIIATLYSIPVGVGAATSIRVSNELGAGNPRGAQVAVCGATIIAVANGLVVSSILLSTRKVFGYA

Click here to download the sequence:
Link to NCBI Protein BLAST