Transcript Information: R_Transcript_43940.p1


Annotated TAIR IDAT5G22250.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7365605-7366441 | Reverse length=278
E-Value4.3E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 155.600331418806
Replicate 265.073640297321
Replicate 340.696012537845
Condition 2: 8 Hour
Replicate 157.046855568582
Replicate 279.848964588914
Replicate 387.475315011014
Condition 3: 24 Hour
Replicate 154.707966159635
Replicate 262.568110327879
Replicate 357.125356913321


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_43940.p1 GENE.R_Transcript_43940~~R_Transcript_43940.p1 ORF type:complete len:282 (+),score=21.53,CAF1|PF04857.16|4e-12,CAF1|PF04857.16|4.7e-08 R_Transcript_43940:237-1082(+)
ATGTTGACTGAATACCCAAAGAAACGCAGTTCTTCATCAAAAAAACCCATCGTGATTCGTGAAGTATGGGCAGCTAATTTGGAGTCAGAATTCGACTTAATCCAAGGTTTAATCGACGAATTTCCTTTTATAGCTATGGACACTGAATTTCCAGGTGTCATCCACCGGCCCCACAAACACCACGTCAACTACCGCAGACCCTCAGATCTATACAAGTTCCTCAAGTCCAACGTTGATGAGTTGAACCTTATCCAAGTTGGCCTCACCTTGTCTGATGCTCATGGTAATCTCCCTGATTTAGGTACCGGAAATCAGTTTATTTGGGAGTTTAATTTCTCAGACTTTGATGTGAAGCGTGACCCTCACGCGTCTGACTCGATCGAGTTACTGAGGCAACACGGGATTGATTTCGAGAGAAACAGTAAAGATGGGATTGACTCGGAACGATTCGCTGAGTTGATGATGTCATCCGGCTTGGTTTGTAATGACTCTGTGAGTTGGGTTACTTTCCACAGCGCGTATGATTTTGGGTACTTGATTAAGATTCTCACGCGCCGTAGCTTGCCTTCCGGTTTAGAGGACTTTCTTGAAGTGGTTAAGGTGTTTTTTGGGGACCGGGTTTATGATATCAAGTATATGATGCGGTTTTGTAATAGCTTGTATGGTGGGTTGGACCGGGTTGCTAAGACTCTTGATGTGAACCGAGCCGTTGGGAAATGCCATCAAGCCGGTTCTGATAGTTTGCTGACGTGGCAAGCGTTTCAGAAAATTGTAGAGGTGTATTTTGTAGGTAATAATGCCCCAGAGAAGTATGCTGGAGTGCTGTATGGACTAGAGGTTTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_43940.p1 GENE.R_Transcript_43940~~R_Transcript_43940.p1 ORF type:complete len:282 (+),score=21.53,CAF1|PF04857.16|4e-12,CAF1|PF04857.16|4.7e-08 R_Transcript_43940:237-1082(+)
MLTEYPKKRSSSSKKPIVIREVWAANLESEFDLIQGLIDEFPFIAMDTEFPGVIHRPHKHHVNYRRPSDLYKFLKSNVDELNLIQVGLTLSDAHGNLPDLGTGNQFIWEFNFSDFDVKRDPHASDSIELLRQHGIDFERNSKDGIDSERFAELMMSSGLVCNDSVSWVTFHSAYDFGYLIKILTRRSLPSGLEDFLEVVKVFFGDRVYDIKYMMRFCNSLYGGLDRVAKTLDVNRAVGKCHQAGSDSLLTWQAFQKIVEVYFVGNNAPEKYAGVLYGLEVY*

Click here to download the sequence:
Link to NCBI Protein BLAST