Transcript Information: R_Transcript_439847.p1


Annotated TAIR IDAT1G31440.1
Annotated Gene NameSH3 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11256150-11258479 | Reverse length=439
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18252960954719
Replicate 20
Replicate 30.45813475192305
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.45915614455408
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_439847.p1 GENE.R_Transcript_439847~~R_Transcript_439847.p1 ORF type:internal len:100 (+),score=14.73,SH3_9|PF14604.2|6.7e-12,SH3_9|PF14604.2|6.3e-05,SH3_1|PF00018.24|1.2e-08,SH3_1|PF00018.24|4.1e-06,SH3_2|PF07653.13|1.1e-08,SH3_2|PF07653.13|0.005 R_Transcript_439847:3-299(+)
GAAATCTCGTTCGATGTTGATGATGTTATAATCGTTACAAAACAAGATAACAGTGGTTGGTGGGAAGGAACAATTAACGGGAAATCAGGAATGTTTCCTGCAAACTATTGTCAAATTATTGAAAGCAAATCAGCAGCCCCAGCGAGAAAGCAATCTCAACCACAGGCCTCCAATGTTAAAAAATGCCGAGTTAACTTTGAGTTCATTGCTTCTACTGATGACGAGCTTAGTATTTATGAAGGTGATATCATCACCATCACCGACACAGCAGAGGGTTGGTTTTCTGGAGTTAATAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_439847.p1 GENE.R_Transcript_439847~~R_Transcript_439847.p1 ORF type:internal len:100 (+),score=14.73,SH3_9|PF14604.2|6.7e-12,SH3_9|PF14604.2|6.3e-05,SH3_1|PF00018.24|1.2e-08,SH3_1|PF00018.24|4.1e-06,SH3_2|PF07653.13|1.1e-08,SH3_2|PF07653.13|0.005 R_Transcript_439847:3-299(+)
EISFDVDDVIIVTKQDNSGWWEGTINGKSGMFPANYCQIIESKSAAPARKQSQPQASNVKKCRVNFEFIASTDDELSIYEGDIITITDTAEGWFSGVNR

Click here to download the sequence:
Link to NCBI Protein BLAST