Transcript Information: R_Transcript_440316.p1


Annotated TAIR IDAT2G33160.1
Annotated Gene Nameglycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:14053404-14056246 | Forward length=664
E-Value4E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45919398628223
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_440316.p1 GENE.R_Transcript_440316~~R_Transcript_440316.p1 ORF type:5prime_partial len:159 (+),score=34.07,RVT_3|PF13456.2|8.1e-09 R_Transcript_440316:1-477(+)
CAAATTTTTGATGGAGCTGAGACCAATTTGGAAGGAAAGAATGGCTTCAACAGATTGGTCAAGGACTACAATGAGTACATGAAGGCTACCAATGCCTACCATAGTGGTCAAAACATGATAAGTTCACTGCCAGATTGGAAGCCACCTGACAGAGGCAATGTGAAGATGAACTCTGATGCTGCGTTTTTGAACGAAGGAATAATTGGACTGGGGGAGGTGATAAGAAGCGATGCTGGGGATGTGATTGCAGCTGGGGTGCGGCATGTGAAAGCTGAATGGAATACTGAGTTTGCTGAGGCAGAAGCCTTTCTATTCGGCCTTCAAGTAGCAGGCAAGCTGGGTTACAGGAGAGCGGAAGGAGAATCTGACTCATTGGGTCTTATCCAGAAGATATCTTACCCCCAAACTAATCTCTCACCTTTGGGTCAAGTAATTGAGGATATTATTTATAATTCCAGTACTTTTAATTTTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_440316.p1 GENE.R_Transcript_440316~~R_Transcript_440316.p1 ORF type:5prime_partial len:159 (+),score=34.07,RVT_3|PF13456.2|8.1e-09 R_Transcript_440316:1-477(+)
QIFDGAETNLEGKNGFNRLVKDYNEYMKATNAYHSGQNMISSLPDWKPPDRGNVKMNSDAAFLNEGIIGLGEVIRSDAGDVIAAGVRHVKAEWNTEFAEAEAFLFGLQVAGKLGYRRAEGESDSLGLIQKISYPQTNLSPLGQVIEDIIYNSSTFNFF*

Click here to download the sequence:
Link to NCBI Protein BLAST