Transcript Information: R_Transcript_44124.p1


Annotated TAIR IDAT5G09880.1
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3081646-3085179 | Reverse length=527
E-Value3E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4900376289566
Replicate 20.85699185372645
Replicate 30.65447821703293
Condition 2: 8 Hour
Replicate 10.19988461181425
Replicate 21.4603024875876
Replicate 30.37044103306912
Condition 3: 24 Hour
Replicate 10.65593734936297
Replicate 20
Replicate 30.3573502806024


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44124.p1 GENE.R_Transcript_44124~~R_Transcript_44124.p1 ORF type:complete len:245 (+),score=86.11,RRM_1|PF00076.18|3.8e+03,RRM_1|PF00076.18|6.1e-08 R_Transcript_44124:374-1108(+)
ATGGATTTCGACGAGTACGAGTACTTAGAGAAGGCAGTGGAGGATCCAATTCTAGACTCGAAATCGAAGTCGAAATCGAAATCGAGCAAAGAAAGCAGCGAGAAGAGAGAGAGAGGCTATCGAAAGAACGATAATGAAGGAGAAGAGGAAGAGAGGAGAAGGAAGAAATCGAGGAGCGAAGAGGAGAATGGCGGAGGAGAGAGAAGGAGAGAGGAGAGAGAGAGGTCTGAGAGGAGGAGAGAGAAAGAGGATAGACACAGAAGTGGTGATAGGGATGGAGATAGGAGAGATAGGGATAGGGAGAGAGAGAAGGAGAGAGAGAGGAGGGAGAGGAGGGAAAGAGAGAAGGAGAAGGAGAGAGAAAGAGAGCGGTCGAGGCGGAGCAGCAGTCGGTCCAGGCGTCATGATAGCCGGGAGAGAGAGAGGGAGAGGGAGAGAGAGAGGGAGAGAGAGTTGAGAGAGCTTGAGAGTAGGGAGAGCAGGAGATTCAAGGAAAAGAAAGAAGCAGCAGAACCTGAAGCTGATCCAGAGAGGGACCAGAGAACTGTTTTTGCCTACCAGATGCCTCTGAAGGCGACTGAGCGAGATGTTTATGAATTCTTCTCAAAAGCTGGAAAGGTGAGGGATGTCAGATTGATCATGGACCGGAATTCACGACGGTCAAAAGGGGTTGGGTATGTTTCGCTGCACTTCTTAGCATACACAGCTGCATGCATTGTTGGAAATAACTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44124.p1 GENE.R_Transcript_44124~~R_Transcript_44124.p1 ORF type:complete len:245 (+),score=86.11,RRM_1|PF00076.18|3.8e+03,RRM_1|PF00076.18|6.1e-08 R_Transcript_44124:374-1108(+)
MDFDEYEYLEKAVEDPILDSKSKSKSKSSKESSEKRERGYRKNDNEGEEEERRRKKSRSEEENGGGERRREERERSERRREKEDRHRSGDRDGDRRDRDREREKERERRERREREKEKERERERSRRSSSRSRRHDSRERERERERERERELRELESRESRRFKEKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVSLHFLAYTAACIVGNNS*

Click here to download the sequence:
Link to NCBI Protein BLAST