Transcript Information: R_Transcript_44128.p1


Annotated TAIR IDAT5G09880.1
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3081646-3085179 | Reverse length=527
E-Value8E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1597014870087
Replicate 22.8048492922536
Replicate 31.1365938501908
Condition 2: 8 Hour
Replicate 10.93457499798646
Replicate 21.7922844223851
Replicate 31.6627429575927
Condition 3: 24 Hour
Replicate 12.0153800238061
Replicate 22.6937720782384
Replicate 32.7568483002581


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44128.p1 GENE.R_Transcript_44128~~R_Transcript_44128.p1 ORF type:complete len:262 (+),score=85.84,RRM_1|PF00076.18|4.1e+03,RRM_1|PF00076.18|7.8e-06 R_Transcript_44128:203-988(+)
ATGGATTTCGACGAGTACGAGTATTTAGAGAAGGCAGTAGAGGATCCAATTACAGACTCGAATTCGAAATCGAAATCGAAATCGAGCAAAGAAAGCAGCGAGAAGAGAGAGAGAGGCTATCGAAAGAACGATAATGAAGGAGAAGAGGAAGAGAGGAGAAGGAAGAAATCGAGGAGCGAAGAGGAGAATGGCGGAGGAGAGAGAAGGAGAGAGGAGAGAGAGAGGTCTGAGAGGAGGAGAGAGAAAGAGGATAGACACAGAAGTGGTGATAGGGATGGAGATAGGAGAGATAGGGATAGGGAGAGAGAGAAGGAGAGAGAGAGGAGGGAGAGGAGGGAAAGAGAGAAGGAGAAGGAGAGAGAAAGAGAGCGGTCGAGGCGGAGCAGCAGTCGGTCCAGGCGTCATGATAGCCGGGAGAGAGAGAGGGAGAGGGAGAGAGAGAGGGAGAGAGAGTTGAGAGAGCTTGAGAGTAGGGAGAGCAGGAGATTCAAGGAAAAGAAAGAAGCAGCAGAACCTGAAGCTGATCCAGAGAGGGACCAGAGAACTGTTTTTGCCTACCAGATGCCTCTGAAGGCGACTGAGCGAGATGTTTATGAATTCTTCTCAAAAGCTGGAAAGGTGAGGGATGTCAGATTGATCATGGACCGGAATTCACGACGGTCAAAAGGGGTTGGCAATGCGATAAAGATTTCCATGATGAGGGATGATGGGAATACCTTGCTCTCATGTTTAATCAATTCATGCAGCATTGTGAAGGTAAGTTTTATTTTGGATACATCATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44128.p1 GENE.R_Transcript_44128~~R_Transcript_44128.p1 ORF type:complete len:262 (+),score=85.84,RRM_1|PF00076.18|4.1e+03,RRM_1|PF00076.18|7.8e-06 R_Transcript_44128:203-988(+)
MDFDEYEYLEKAVEDPITDSNSKSKSKSSKESSEKRERGYRKNDNEGEEEERRRKKSRSEEENGGGERRREERERSERRREKEDRHRSGDRDGDRRDRDREREKERERRERREREKEKERERERSRRSSSRSRRHDSRERERERERERERELRELESRESRRFKEKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIKISMMRDDGNTLLSCLINSCSIVKVSFILDTSL*

Click here to download the sequence:
Link to NCBI Protein BLAST