Transcript Information: R_Transcript_4418.p1


Annotated TAIR IDATMG00240.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF111A
Annotation TypeHomolog
Chromosome PositionchrM:68918-69253 | Reverse length=111
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0843203182396
Replicate 26.0655978980417
Replicate 37.3810598920936
Condition 2: 8 Hour
Replicate 17.3457594841736
Replicate 26.7082645523557
Replicate 38.0673824979498
Condition 3: 24 Hour
Replicate 18.9280361441071
Replicate 25.146227074468
Replicate 37.7822949997857


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4418.p1 GENE.R_Transcript_4418~~R_Transcript_4418.p1 ORF type:complete len:90 (+),score=11.53 R_Transcript_4418:2583-2852(+)
ATGTATGCTATGATCTACACTAGACCTAATTTGGCACGATCTATTAATGTCCTTAGCAGGTTTATGTCTAACATTGGGAAAGAATGTTGGCAAGGTGTGAAATGTGTCTTTCGCTATTTGAGAGGTACATCTGATGTTGGTTTGATTTATGGTAGTGGCACTCAGTATTTAGTTGCTAGTTATTCTGAATCTAATTATGCCAGAGATGTTGATAGTAGGAGGTCCATGACTATTTATGTGTTTGTTCTTGGTGGTTCTATGATCAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4418.p1 GENE.R_Transcript_4418~~R_Transcript_4418.p1 ORF type:complete len:90 (+),score=11.53 R_Transcript_4418:2583-2852(+)
MYAMIYTRPNLARSINVLSRFMSNIGKECWQGVKCVFRYLRGTSDVGLIYGSGTQYLVASYSESNYARDVDSRRSMTIYVFVLGGSMIS*

Click here to download the sequence:
Link to NCBI Protein BLAST