Transcript Information: R_Transcript_442.p1


Annotated TAIR IDAT5G48560.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19684160-19686871 | Forward length=498
E-Value3.3E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.988428245935
Replicate 213.074619306852
Replicate 318.753318141905
Condition 2: 8 Hour
Replicate 114.260998265978
Replicate 217.814988280065
Replicate 319.714111900897
Condition 3: 24 Hour
Replicate 115.052921222561
Replicate 212.44142809212
Replicate 315.433637920248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_442.p1 GENE.R_Transcript_442~~R_Transcript_442.p1 ORF type:complete len:546 (+),score=122.23,HLH|PF00010.22|3e-06 R_Transcript_442:314-1951(+)
ATGGATAAAGAATTCTTCATGAATGCTAGTATGCCACCTCCACTTCAATTTGATCATCCATTCTCTTCAGCAATGAGCACAACATGGCAAACACTCTCAGCAGCAATGGAAATCCAACCTTTTCAATCCAATGATACTTTTCTCTCTCCTCCCCCTAGTACTACAGCTGATCACTTTGAGTCTGCTCTAAGCTCCATGGTTTCCTCCCCTAATGCTTCGGGCTCGTCGAACGACAATTTCATGATCAGAGAGTTGATTGGCAAATTGGGCAACATTTGCAACTCCGGCGATATCCCCACCAGTGCACCACCAGGCTTTCCACCATACATTGGCGGCGTTGGAGGTGGGAGTTGTAGCACCAACAATTCTTGCTATAGCACCCCATTGAATTCACCCCCAAAAGTTGCTGGGATGCCAATTATGGATCATTTAGTGAAAGAAAACTTCCCCACTTTGGGGAATTCAATTCCCTTGGGCTCAAATTTGCCTGCAATGCCAGGAGATCCTGGATTCGCGGAACGAGCGGCGAGGTTCTCTTCGTTTGGTAGTAGGAGTTTCAATGGCAGGACAAGCCAATTTGTAGCTAATAATAACAACCCAGATTATCAATATAGATCAAACTCTTCTAATTTAGGTGGGAGTGGCAAGTTACATAGAGTTTCTAGTAGCCCTTCTCTAAAGGAAGCTGGACCTCAAGCTGAAAATATTAGGAATTCCTTAGGTAACTCCATCAATGAGAGGAGAAATACAGGTACTTCTGTTCCAGATCAAAGTGAATTGTGTAAGTCTCTTGAAAATTCATCAGCTTCTGGTCAAAATACCCCAAACAGGAAAAGAAAAGCAGGTCCCAAAGGCAAAACAAAGGAAAATCAAGCTCCCGTCAAAGAAGATGAAAATGGAGAGGATTCAAGTGCAAAGAGAACAAAGTCAGAGGATGGAAGTGGTAAAGAAGATGCAAAAACAGAGGAAAACAGAGGAGATGAAAACAAGAAACAGAGCAATTCTAATCAAAAGCCTCCTGAAGCTCCAAAAGATTATATTCATGTTAGAGCTAGGAGGGGTCAAGCCACTGATAGCCATAGTCTTGCTGAAAGAGTTAGGAGAGAAAAAATTAGTGAAAGAATGAAGCTCCTTCAGGATCTTGTACCTGGCTGCAATAAGGTGACTGGAAAAGCACTAATGCTTGATGAAATAATCAACTATGTTCAATCCTTGCAGAGACAAGTTGAGTTCCTTTCAATGAAATTAGCCTATGTGAATCCACGGCTAGAGCTCAACATGGATAACCTTTTCTCAAAGGATGCGATCCAACCAAATTGCTCAATGCCGCATCCAATGTACCCAATAGATTCCTTGGCACCAACCCTTTATGGCCAGCGTCATCAAAATCCCTTAGCAACAACAAGCGGACCTCCTCCTTCAATAGCCCCATCTCAGATGGACCCCTTATATCCAAATCATGCCTTGCAATTACCTCCAATTGATGGTTTTTCTAATGTTGCCCCTCCGCTATCATCACTATGTGAGGGAGACTTGCAGAGTATTGTTCAGATGGGTTATGGCCAAAAGGAGACTGGATTTCAATCACAACCTTTACTTGGGGCAAATCAAACACCACTAATGAAAATTGAGTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_442.p1 GENE.R_Transcript_442~~R_Transcript_442.p1 ORF type:complete len:546 (+),score=122.23,HLH|PF00010.22|3e-06 R_Transcript_442:314-1951(+)
MDKEFFMNASMPPPLQFDHPFSSAMSTTWQTLSAAMEIQPFQSNDTFLSPPPSTTADHFESALSSMVSSPNASGSSNDNFMIRELIGKLGNICNSGDIPTSAPPGFPPYIGGVGGGSCSTNNSCYSTPLNSPPKVAGMPIMDHLVKENFPTLGNSIPLGSNLPAMPGDPGFAERAARFSSFGSRSFNGRTSQFVANNNNPDYQYRSNSSNLGGSGKLHRVSSSPSLKEAGPQAENIRNSLGNSINERRNTGTSVPDQSELCKSLENSSASGQNTPNRKRKAGPKGKTKENQAPVKEDENGEDSSAKRTKSEDGSGKEDAKTEENRGDENKKQSNSNQKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLAYVNPRLELNMDNLFSKDAIQPNCSMPHPMYPIDSLAPTLYGQRHQNPLATTSGPPPSIAPSQMDPLYPNHALQLPPIDGFSNVAPPLSSLCEGDLQSIVQMGYGQKETGFQSQPLLGANQTPLMKIEF*

Click here to download the sequence:
Link to NCBI Protein BLAST