Transcript Information: R_Transcript_44256.p1


Annotated TAIR IDAT3G08505.2
Annotated Gene Namezinc finger (CCCH-type/C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2580603-2582043 | Reverse length=323
E-Value1E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.992397352873
Replicate 27.5401078843059
Replicate 312.90876925308
Condition 2: 8 Hour
Replicate 110.754841233735
Replicate 211.551063271552
Replicate 317.750470054191
Condition 3: 24 Hour
Replicate 112.493613325574
Replicate 211.636890740609
Replicate 311.185705433912


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44256.p1 GENE.R_Transcript_44256~~R_Transcript_44256.p1 ORF type:complete len:362 (+),score=58.32,zf-CCCH|PF00642.20|0.031,zf-CCCH|PF00642.20|2.8e-06,zf-CCCH|PF00642.20|0.00031,zf-CCCH|PF00642.20|3,Torus|PF16131.1|0.00015,Torus|PF16131.1|0.0023,Torus|PF16131.1|0.0061,Torus|PF16131.1|2.6,zf-CCCH_3|PF15663.1|1.6e-08,zf-CCCH_3|PF15663.1|39,zf-CCCH_3|PF15663.1|1.7e+02,zf-RING_2|PF13639.2|5e+03,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|7.3e-08,zf-RING_2|PF13639.2|1.2e+04,zf-C3HC4|PF00097.21|1.6e+04,zf-C3HC4|PF00097.21|2.9e-07,zf-RING_5|PF14634.2|4.5e+03,zf-RING_5|PF14634.2|1.1e+04,zf-RING_5|PF14634.2|7e-06 R_Transcript_44256:158-1243(+)
ATGTCCAATAGGATTTTGTGCAAGTTCTTTGCTCATGGAGCATGTCTCAAAGGAGAGCATTGTGAATATGCACATGATTGGACTGCCCCTGCAAATAATATTTGCACCTTCTATCAGAGAGGAAACTGCGCTTATGGCAGTAGATGCAGATATGATCATGTCAAAGTTTCTAGGACGCAGTCTTCTGGTTCCTCATCATCAACTGTTTCCGTTGGGCCAAAAGTCTCAGGTTCATCTTCAATTTCGTCTTCTGCAGTAACTATAAGTGGGACGGCTCCAATTGCTAGTGTTAAAGCAGAACTATCTCCTTCAAGCAGACAATTCCTTCCTTCAAGCATAACTACATGGAGTCAACAATCTGGCACTACTGACACTTTAGAAGATGGTTTTGGGGGGGAAACTAGGGTAGATGGACCGGCTGATCAAGTTATTTGTTCATTTGCTGCTGCTGGACACTGCCCTAGGGGGGACAAATGTCCTCACATTCACGGGGACTTGTGTCCAACTTGTGGAAAGCATTGCTTGCATCCCTTTAGGCCCAAAGAACGCGAAGAACATTCCAGAGCTTGTGAGAAAATGCAAAGGCACCTTGAATCACTTAAACGTAGTCAAGAGATAGAATGCAGTGTGTGCTTAGAGCGTGTGCTCTCAAAGCTAAAACCAGGTGAACGGAAGTTTGGGTTGATGTCAGAATGTGATCATCCATTCTGTATTTCTTGCATCAGGGAATGGCGTAGCAGTTCTCCTACTTCTGGGATGGATGTTAATTCCACATTAAGGGCCTGCCCCATATGTCGCAAGCTTTCATATTTTGTGATTCCAAGTGTAATTTGGTATTTCTCAAAAGATGAGAAGGAGGAAATCATTGACAATTACAAGGCCAAACTTAAGTCCATTGATTGCAAGTATTTTGATTTTGGCAATGGTTCATGCCCTTTTGGAACTAGTTGCTTTTACAAGCATGCTTATCGCGATGGCCGTCTTGAGGAAGTGGCTTTATGTCATCTTGGGGCTTCTGATGGACAGACTATTATTGTTAAAAATATTAGGCTTTCAGACTTCCTTAACGATATGCACATAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44256.p1 GENE.R_Transcript_44256~~R_Transcript_44256.p1 ORF type:complete len:362 (+),score=58.32,zf-CCCH|PF00642.20|0.031,zf-CCCH|PF00642.20|2.8e-06,zf-CCCH|PF00642.20|0.00031,zf-CCCH|PF00642.20|3,Torus|PF16131.1|0.00015,Torus|PF16131.1|0.0023,Torus|PF16131.1|0.0061,Torus|PF16131.1|2.6,zf-CCCH_3|PF15663.1|1.6e-08,zf-CCCH_3|PF15663.1|39,zf-CCCH_3|PF15663.1|1.7e+02,zf-RING_2|PF13639.2|5e+03,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|7.3e-08,zf-RING_2|PF13639.2|1.2e+04,zf-C3HC4|PF00097.21|1.6e+04,zf-C3HC4|PF00097.21|2.9e-07,zf-RING_5|PF14634.2|4.5e+03,zf-RING_5|PF14634.2|1.1e+04,zf-RING_5|PF14634.2|7e-06 R_Transcript_44256:158-1243(+)
MSNRILCKFFAHGACLKGEHCEYAHDWTAPANNICTFYQRGNCAYGSRCRYDHVKVSRTQSSGSSSSTVSVGPKVSGSSSISSSAVTISGTAPIASVKAELSPSSRQFLPSSITTWSQQSGTTDTLEDGFGGETRVDGPADQVICSFAAAGHCPRGDKCPHIHGDLCPTCGKHCLHPFRPKEREEHSRACEKMQRHLESLKRSQEIECSVCLERVLSKLKPGERKFGLMSECDHPFCISCIREWRSSSPTSGMDVNSTLRACPICRKLSYFVIPSVIWYFSKDEKEEIIDNYKAKLKSIDCKYFDFGNGSCPFGTSCFYKHAYRDGRLEEVALCHLGASDGQTIIVKNIRLSDFLNDMHIS*

Click here to download the sequence:
Link to NCBI Protein BLAST