Transcript Information: R_Transcript_442826.p1


Annotated TAIR IDAT1G61520.1
Annotated Gene Namephotosystem I light harvesting complex gene 3
Annotated Gene Symbol(s)LHCA3
Annotation TypeOrtholog
Chromosome Positionchr1:22700152-22701149 | Forward length=273
E-Value4E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.74363915000706
Replicate 20.77764075615919
Replicate 30.25451930662392
Condition 2: 8 Hour
Replicate 10
Replicate 20.33127232357312
Replicate 30
Condition 3: 24 Hour
Replicate 10.085028915658163
Replicate 20.16337228807835
Replicate 30.32426229165774


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_442826.p1 GENE.R_Transcript_442826~~R_Transcript_442826.p1 ORF type:complete len:270 (+),score=0.34,Chloroa_b-bind|PF00504.17|8.7e-49 R_Transcript_442826:94-903(+)
ATGGCGGCTCAGGCTCTTCTCTCTGGGAGGCAGCTGCTGGGGAGGCCATTGCAATCTTCAGTCTCCAGGTCTTCTTCCTCCAGGAAGGCACCCTTCATGGTCAGGGCAGAGGCCACTCCCCCTGCCAAGCAAGGTGCTGACAGGCAGCTGTGGTTCGCATCCAAGCAGTCCCTGAGCTACCTGGATGGCACGCTTCCGGGAGACTTCGGGTTCGACCCGCTGGGGCTATCGGACCCGGAGGGGACCGGCGGGTTCATCGAGCCACGGTGGCTGGCCTACGGCGAGGTGTTCAACGGCCGGACGGCGATGATGGGCGTCGTCGGCATGGTCGCCCCGGAGCTCCTCGGCAAGCTGGGCCTCGTCCCCGCCGAGACGGCGATCCCGTGGTTCCAGACCGGCGTGATCCCCCCCGCGGGCACCTACACCTACTGGGCCGACCCTTACACCCTCTTCGTCTTCGAGCTCGCCCTCGTCGGCTTCGCCGAGCACCGCCGCTTCCAGGACTGGTACACGCCGGGCTCCATGGGGAAGCAGTACTTCCTCGGCCTCGAGAAGTACCTCGCCGGCTCCGGCGAGCCGGCCTACCCCGGCGGCCCGCTCTTCAACCCGCTCGGCTTCGGGACCAAGAGCGAGGCGGAGATGAAGGAGCTCAAGCTCAAGGAGATCAAGAATGGCAGGCTCGCCATGCTCGCCTTCCTCGGCTTCTCCGTCCAGGCGCTCTTCACCGGGGTTGGCCCCGTGCAGAACCTGCTTGATCACCTCGCTGATCCCGTCCACAACAACATCCTCACCAGCCTCAAGTTCCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_442826.p1 GENE.R_Transcript_442826~~R_Transcript_442826.p1 ORF type:complete len:270 (+),score=0.34,Chloroa_b-bind|PF00504.17|8.7e-49 R_Transcript_442826:94-903(+)
MAAQALLSGRQLLGRPLQSSVSRSSSSRKAPFMVRAEATPPAKQGADRQLWFASKQSLSYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVFNGRTAMMGVVGMVAPELLGKLGLVPAETAIPWFQTGVIPPAGTYTYWADPYTLFVFELALVGFAEHRRFQDWYTPGSMGKQYFLGLEKYLAGSGEPAYPGGPLFNPLGFGTKSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSLKFH*

Click here to download the sequence:
Link to NCBI Protein BLAST