Transcript Information: R_Transcript_44286.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value7E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8060317567334
Replicate 20.94178656220862
Replicate 31.2390187881824
Condition 2: 8 Hour
Replicate 11.2921300763718
Replicate 21.474992205883
Replicate 31.3889095197658
Condition 3: 24 Hour
Replicate 11.5143672313789
Replicate 20.84380278077407
Replicate 32.0790431892567


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44286.p1 GENE.R_Transcript_44286~~R_Transcript_44286.p1 ORF type:complete len:758 (+),score=102.07,zf-RVT|PF13966.2|1.4e-22,zf-RVT|PF13966.2|1.2e+03,RVT_3|PF13456.2|2.7e-19 R_Transcript_44286:2560-4833(+)
ATGTGCATGGAAAGATTGCATCACCTCATTGAAGATTCAATCAGTTGTGGATTATGGAAACCCATCCAATGCAGCAAAGGGGGTCCATGGCTATCCAATTTATTCTTTGCTGACGACATTGTGCTTTTTGCAGAGGCTACTCCTGAACAAGCTTTATTAATCAAACATTGTCTTGACAGATTTTGCAGGGCTTCTGGGGAATTAGTCTCTTACCCAAAATCAAGAATTTATTTCTCTAAGAACGTCAGTTCTGAAGCTGCCTTTACTATCAGCAATATTCTGGATATACAATCCACTCAAGATCTTGGGTTCTACCTAGGAGTTCCGACTATAAATGGTAGAGTCACTAAGACTACTTTTGCCTACGTGATGGACAAATTGGAAGCTCGCTTGAATGGCTGGAAATCAAGATGTCTTTCACTTGCTGGGCGTACGACCCTGACTAAGGCGGTGTTGTCCTCAATGGCAACATATGCCATGCAATCTTCCCACTTACCACGCTCTATATGTGATGACATCGACAGGAAAACTCGCAAATTCCTCTGGGGCAGTGTCGGGGAGCAAAAGAAAATCCATTTAGTGTCTTGGGACACTATTCAGAAACCCAGAAAAGCAGGTGGCCTTGGCATCAAATCTATGTGTCAGGTTAACGCGGGGTTCATGGCCAAACTTGGTTGGCGTATATTGACAGAACCGAACTCCTTATGGGCGCAGGTTCTAAGAGCAAAATATTATCAGGGAAGGAAAGATCTTGATATGTTTCTTCAGAAGTCGAATTCGTCGAACACTTGGAGAGGTATTACTGCCAATGTTGAACTCATACGCAAGGGAGCAAGAGTGGCTGTTGGCAATGGGCAGAAGACTTTGTTTTGGGATCATAGATGGGCCCTTCATACTCCTCTTTCAGCCTTCACCTTACGAGAGGTTCCCTTGATTGATCAAGACCGGACAGTTGAAGAGTATTGGGACCCGAAGGGATATTGGAAATGGGATGATATCGCAAATTACTTACCTCAAGAGGTCTTACGTCATCTTCTTCCATTCTCTCTTGTCCCAGAGGAGGATGATGCTTTCTTTTGGGAAGGAACCTCGGATGGGAAGTTCTCATTGAAGACAGCCATGCAATTGCAACGACAAGAATCTGAGACAACAAATAACAAGGCTTGGGATGTCATTTGGAAAGTTCCAGTTTCGCAAAGGGTGAGAATGTTCCTGTGGCTGCTCATGCATGACCGTTTGTTGACTAATGCAAACCGTGTTGCAAGGGGTCTGTCTGATGACCCGAGGTGTGCAAGCTGTGGTGCAAATGAAGAATCAATCGATCACTTATTCAGACGTTGTCCCCATGCTCGCTCTATATGGACAAATGCAAGTGTTTTCTCCATTCCTTCATGCTTTTGGACTCTGCCCATAGATATGTGGTTAATAGATAATCTGGATATTCACAATGTTAAGCTACAAGAAGATGCACCCATGCGATTTGCTATTACTCTCTGGTGGCTATGGCGGTGGCGCAACAATCGAACGTTTGGAAGAAGAAATGAAATGCCACAAGACACATCAAGGTTTCTTAATGCTAGATTCCTAGAGACTAAGAAAGCCATGGGCTTTGATGAACTCTTTCATGGAACTACTTCACCAAAGCGGCATGAAGTCCTCATAAACTGGACGTCCCCCCCTGATGGATGGGTTTCTTTGAATTCAGATGGTGCCAGCAAAGGCAACCCAGGACCAGCAGGTGGAGGGGGCTTACTCAGAAACTCCAGGGGAGAATGTATAGCAGCTTATTCTGAGAACTATGGGTACTGCACTGTGTCTATGGCGGAGGCCTTGGCTGTCCTAAAAGGCTTGCAAGTGGCGAGAGCTAAGGGCATCACAAAGCTGTGGGTTTGCTTGGACTCCAAAGCTATTATGCAAGGCATAAGAGATGGTAGCATGAGTTCTGGACCTATTCAACATATTCTCAAGAGATGTCGTCATTTGATTCGTTCTGCTGATTGGTTAGTGGAGGTAAAGCATTGTTATAGGGAAGCTAACCGAGGAGCTGATTGGTTAGCTAACACTGGAGTGATGCAAGCCTCAAAATCGATTGAATTGGAAAGCCTTCCCCAAGAGCTGAAAACAATCCTTCTGGAGGACATCAGGGTACTGCTATTCCAAGAAGAATTCCTCTTTAGTGTTTTAGTGCTTTCTGTAGTTTGTAGTTTACTTTCTTGTTGTATTTTCTTTGTTCCTTGTGAGTTTCCTCACTCCGTAGCACCAAAAAAAAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44286.p1 GENE.R_Transcript_44286~~R_Transcript_44286.p1 ORF type:complete len:758 (+),score=102.07,zf-RVT|PF13966.2|1.4e-22,zf-RVT|PF13966.2|1.2e+03,RVT_3|PF13456.2|2.7e-19 R_Transcript_44286:2560-4833(+)
MCMERLHHLIEDSISCGLWKPIQCSKGGPWLSNLFFADDIVLFAEATPEQALLIKHCLDRFCRASGELVSYPKSRIYFSKNVSSEAAFTISNILDIQSTQDLGFYLGVPTINGRVTKTTFAYVMDKLEARLNGWKSRCLSLAGRTTLTKAVLSSMATYAMQSSHLPRSICDDIDRKTRKFLWGSVGEQKKIHLVSWDTIQKPRKAGGLGIKSMCQVNAGFMAKLGWRILTEPNSLWAQVLRAKYYQGRKDLDMFLQKSNSSNTWRGITANVELIRKGARVAVGNGQKTLFWDHRWALHTPLSAFTLREVPLIDQDRTVEEYWDPKGYWKWDDIANYLPQEVLRHLLPFSLVPEEDDAFFWEGTSDGKFSLKTAMQLQRQESETTNNKAWDVIWKVPVSQRVRMFLWLLMHDRLLTNANRVARGLSDDPRCASCGANEESIDHLFRRCPHARSIWTNASVFSIPSCFWTLPIDMWLIDNLDIHNVKLQEDAPMRFAITLWWLWRWRNNRTFGRRNEMPQDTSRFLNARFLETKKAMGFDELFHGTTSPKRHEVLINWTSPPDGWVSLNSDGASKGNPGPAGGGGLLRNSRGECIAAYSENYGYCTVSMAEALAVLKGLQVARAKGITKLWVCLDSKAIMQGIRDGSMSSGPIQHILKRCRHLIRSADWLVEVKHCYREANRGADWLANTGVMQASKSIELESLPQELKTILLEDIRVLLFQEEFLFSVLVLSVVCSLLSCCIFFVPCEFPHSVAPKKK*

Click here to download the sequence:
Link to NCBI Protein BLAST