Transcript Information: R_Transcript_44291.p1


Annotated TAIR IDAT1G76160.1
Annotated Gene NameSKU5 similar 5
Annotated Gene Symbol(s)sks5
Annotation TypeOrtholog
Chromosome Positionchr1:28578211-28581020 | Reverse length=541
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.206337199164
Replicate 270.852829264593
Replicate 370.875643816878
Condition 2: 8 Hour
Replicate 131.44310332709
Replicate 223.928618944442
Replicate 330.341991184632
Condition 3: 24 Hour
Replicate 171.796094558964
Replicate 287.488573089928
Replicate 366.349628783344


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44291.p1 GENE.R_Transcript_44291~~R_Transcript_44291.p1 ORF type:complete len:542 (+),score=75.05,Cu-oxidase|PF00394.18|5.9e+03,Cu-oxidase|PF00394.18|3.1e-43,Cu-oxidase|PF00394.18|51,Cu-oxidase_3|PF07732.11|3.4e-34,Cu-oxidase_3|PF07732.11|1.5,Cu-oxidase_2|PF07731.10|34,Cu-oxidase_2|PF07731.10|3e+02,Cu-oxidase_2|PF07731.10|7.1e-29 R_Transcript_44291:237-1862(+)
ATGAGATCAAGAGGGTCGGCATTATTACAAGCCTTGGTTTGCTTTGTTTCTTTGTTCAACATTGTGTTTTCTGAGAACCCTTACAGATTCTTTGAATGGAATGTCACTTATGGTACAATTTACCCTCTTGGTGTTCCTCAGCAGGGTATATTGATAAATGGGCAGTTCCCAGGACCAGACATTCACTCTGTGACTAATGACAATCTTATCATCAACGTTTACAACAGTCTTGATGTTCCCTTCTTGCTCTCCTGGAATGGAATTCAGAACAGGAGGAACTCATTCGAAGATGGTGTATGGGGTACAACATGCCCAATTCCACCAGGGAAGAACTTCACTTACATTCTTCAAGTCAAAGATCAAATTGGTAGTTTCTACTACTTCCCGTCTCTTGCATTCCACAAGGCTGCTGGTGGTTTTGGAGGGATCAGGATCCTTAGCAGGCCCGGAATCCCGGTGCCTTTCTCACCCCCAGCTGAGGACTACACTGTTCTGATTGGAGATTGGTACAAGACTAACCACACGGTTTTGCAAAGCATCCTTGACAAAGGACACAGGCTTCCTGACCCGGATGGGATCCTAATCAATGGTCGTGGTAGTGGCGCCACTTTAAACATGGAGCAAGGCAAGACTTACAGGCTCAGGATCTCGAATGTTGGTCTACAAAATTCTCTTAATTTCCGAATCCAAGGTCACAAAATGAAGGTTGTAGAAGTTGAGGGAACCCACACCCTCCAAACTACATTCTCCTCACTCGATGTCCACGTGGGGCAGTCCTACTCAGTATTGGTTACTGCTGATCAGCCTGCTCAGGACTACTACATTGTCGTTTCATCTCGTTTTACCTCTCCTGTTATCACCACCACCGGTGTTCTTCGTTATGCCAACTCAGCTGGCCAAGTATCTGGTCCGATCCCTGGTGGGCCCACTATCCAAATCGACTGGTCCCTCAACCAGGCCCGTGCTATAAGGATCAATCTTACTGCTAGTGGACCAAGGCCAAACCCACAAGGATCTTACCATTATGGATTGATCAACACTACCAAGACTATTATTCTGCAAAATTCTGCAGGCCAAGTCAACGGCAAGCAGAGATATGCTGTTAACAGCGTGTCATTCATCCCCGCTGACACTCCCCTTAAGCTTGCAGACTACTTCAAGATTGGAGGCGTCTTCAGCGTGGGAAGCATCCCCTACCAGCCTAGCGGTGCAGGGATCTACCTCGCCACTTCTGTGATGGGTGTCAACTACAGAGAATTTGTCGAGATTGTGTTTCAGAACACCGAAAACATTGTTCAAAGCTATCATTTGGATGGTTACAACTTCTTTGTTGTTGGAATGGATGGAGGAACATGGACACCGGCTAGCAGAAAGAACTACAATCTCCGTGATGCAGTTTTCCGTTGCACCACACAGGTGTATCCAAATTCATGGACTGCAATCTACGTGGCGCTGGACAATGTGGGTATGTGGAACCTGAGGTCCGAGTTCTGGGCAAGGCAATACCTTGGACAACAATTGTATCTCCGAGTCTATACAACTTCGACATCCCTAAGGGATGAATTCCTTATTCCAAGGAATGCCCTTACTTGTGGCAGAGCTGCCGGCAGGCGTACAAGGCCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44291.p1 GENE.R_Transcript_44291~~R_Transcript_44291.p1 ORF type:complete len:542 (+),score=75.05,Cu-oxidase|PF00394.18|5.9e+03,Cu-oxidase|PF00394.18|3.1e-43,Cu-oxidase|PF00394.18|51,Cu-oxidase_3|PF07732.11|3.4e-34,Cu-oxidase_3|PF07732.11|1.5,Cu-oxidase_2|PF07731.10|34,Cu-oxidase_2|PF07731.10|3e+02,Cu-oxidase_2|PF07731.10|7.1e-29 R_Transcript_44291:237-1862(+)
MRSRGSALLQALVCFVSLFNIVFSENPYRFFEWNVTYGTIYPLGVPQQGILINGQFPGPDIHSVTNDNLIINVYNSLDVPFLLSWNGIQNRRNSFEDGVWGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPGIPVPFSPPAEDYTVLIGDWYKTNHTVLQSILDKGHRLPDPDGILINGRGSGATLNMEQGKTYRLRISNVGLQNSLNFRIQGHKMKVVEVEGTHTLQTTFSSLDVHVGQSYSVLVTADQPAQDYYIVVSSRFTSPVITTTGVLRYANSAGQVSGPIPGGPTIQIDWSLNQARAIRINLTASGPRPNPQGSYHYGLINTTKTIILQNSAGQVNGKQRYAVNSVSFIPADTPLKLADYFKIGGVFSVGSIPYQPSGAGIYLATSVMGVNYREFVEIVFQNTENIVQSYHLDGYNFFVVGMDGGTWTPASRKNYNLRDAVFRCTTQVYPNSWTAIYVALDNVGMWNLRSEFWARQYLGQQLYLRVYTTSTSLRDEFLIPRNALTCGRAAGRRTRP*

Click here to download the sequence:
Link to NCBI Protein BLAST