Transcript Information: R_Transcript_442940.p1


Annotated TAIR IDAT5G10480.3
Annotated Gene NameProtein-tyrosine phosphatase-like, PTPLA
Annotated Gene Symbol(s)PAS2
Annotation TypeHomolog
Chromosome Positionchr5:3298047-3300048 | Reverse length=230
E-Value2E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.095067504972494
Replicate 20.10935573133489
Replicate 30.11930592497996
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.23914382528858
Replicate 20.34461342016527
Replicate 30.11399846191092


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_442940.p1 GENE.R_Transcript_442940~~R_Transcript_442940.p1 ORF type:internal len:192 (+),score=-16.34,PTPLA|PF04387.10|2.1e-58 R_Transcript_442940:3-575(+)
TACATTTTGGTTTCGGTTATCATGAATTATGCAGAAGGTCAACCAAAAGAAGCGGTTTGGGGAAAGGTGGGTACCGCTTTGATGATTTTTCAAAATGCTGCGATATTGGAAATTCTTCATTGCATGATTGGTATCGTTCGCGCACCAGTTTTCACTACTTTGGTTCAAGTTGCTTCTCGTGTGTTGATCACGAGTTTAATTTGCTGGAACATTCCCGACTCGAGAGAACACTACGTATTCACATCATTGATGCTAAGTTGGTCGATCACTGAAGTGGTTCGATATTCGTATTATGCGATCAATTTGTGGGGAAGCGCTCCGTTCATCTTAACTTGGCTTCGATATTCGTTATTTCTTGTGTTATACCCGAGCGGTGTTGCTTCCGAAATCGGAACCATCATCGTTGGATTACCGTACATCAAACAAACCGACATGTTCGGACTTTCTCTTCCCAACAAACTCAATTTTGCTTTCGATCTTTATTACGCGCTCATTTTCATCATTTTGGTTTACATTCCCGGCCTTCCCACGATGTATAATCACATGCGAGCGCAACGCGTTCGTTATTTGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_442940.p1 GENE.R_Transcript_442940~~R_Transcript_442940.p1 ORF type:internal len:192 (+),score=-16.34,PTPLA|PF04387.10|2.1e-58 R_Transcript_442940:3-575(+)
YILVSVIMNYAEGQPKEAVWGKVGTALMIFQNAAILEILHCMIGIVRAPVFTTLVQVASRVLITSLICWNIPDSREHYVFTSLMLSWSITEVVRYSYYAINLWGSAPFILTWLRYSLFLVLYPSGVASEIGTIIVGLPYIKQTDMFGLSLPNKLNFAFDLYYALIFIILVYIPGLPTMYNHMRAQRVRYLK

Click here to download the sequence:
Link to NCBI Protein BLAST