Transcript Information: R_Transcript_442974.p2


Annotated TAIR IDAT4G05095.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT4G04650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2613798-2614214 | Reverse length=138
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14260125745874
Replicate 20
Replicate 30.17895888746994
Condition 2: 8 Hour
Replicate 10.19129581990035
Replicate 20.87347194692131
Replicate 30.28361891594355
Condition 3: 24 Hour
Replicate 10.17935786896644
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_442974.p2 GENE.R_Transcript_442974~~R_Transcript_442974.p2 ORF type:complete len:128 (+),score=16.97,zf-RVT|PF13966.2|8.7e-09,zf-RVT|PF13966.2|4.2e+02 R_Transcript_442974:464-847(+)
ATGACCAGGAGAGGTTTGCAATTGGTGAACAGGTGCATTTTGTGCAAAAACCAACAGGAAACCACCCAGCATCTTTTCTTCAGGTGCGAAGTAGCTGCTAAGATCTGGCAAAGTGTATTAAACTGGTTGAAACTAACAAGAAGAGCCAAAAGCCATAAAGGAGAACTCAAATGGTTCTATAAGCATGTTCGAGGAAATCAATGGCCAAAGAAGTGGAAGAGGAATGCATTGGTTGCTACCATATACGAGATTTGGAGGGAGAGAAATAGAAGACTCTTTGCTGAAGAAAGTCGACCAGTGGAGCAGATTATTCAGTACATTAAGTATATAGTTTGTGTTAGACTTTTGTCTAGATGTTCACCTCAGGATGAATGGTTGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_442974.p2 GENE.R_Transcript_442974~~R_Transcript_442974.p2 ORF type:complete len:128 (+),score=16.97,zf-RVT|PF13966.2|8.7e-09,zf-RVT|PF13966.2|4.2e+02 R_Transcript_442974:464-847(+)
MTRRGLQLVNRCILCKNQQETTQHLFFRCEVAAKIWQSVLNWLKLTRRAKSHKGELKWFYKHVRGNQWPKKWKRNALVATIYEIWRERNRRLFAEESRPVEQIIQYIKYIVCVRLLSRCSPQDEWLL*

Click here to download the sequence:
Link to NCBI Protein BLAST