Transcript Information: R_Transcript_443097.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13037829253371
Replicate 20.14997357440213
Replicate 30.16361955425823
Condition 2: 8 Hour
Replicate 10
Replicate 20.1597205845799
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.15753756350412
Replicate 30.15634074776355


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_443097.p1 GENE.R_Transcript_443097~~R_Transcript_443097.p1 ORF type:5prime_partial len:140 (+),score=23.05,RVT_1|PF00078.23|4.2e-17 R_Transcript_443097:1-420(+)
GGGAGATTGATAACGGATAACATTCTGATGGCTTTTGAGTCTTTCCATTTCATGAAGTCTGAAAAGTCTAAAGAAGGTTATGCGGCTCTCAAACTAGATATGGCTAAGGCCTATGATAGAGTGGATTGGAATTTCTTGGAGTTGGTTCTTTTTAAATTTGGTCTTGATCCCGTGTGGGTTGATAGAGTCATGGTGTGTGTAAGGTCGGTCTCCTTTGCTGTGCTCCTTAATGGCTCTCCAACGGAAGATTTCTACCCAGAAAGAGGGCTCCGTCAGGGGGACCCGATATCACCTTACTTGTTTCTTCTTGTTACTGAAGCACTTTCAGGTTTGCTACGCAAAGCGGAGATGCAGGGTGCTCTTTATGGTGTACGCATTTGTCAAGGTGCTCATGATCACACACCTCTTCTTTGCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_443097.p1 GENE.R_Transcript_443097~~R_Transcript_443097.p1 ORF type:5prime_partial len:140 (+),score=23.05,RVT_1|PF00078.23|4.2e-17 R_Transcript_443097:1-420(+)
GRLITDNILMAFESFHFMKSEKSKEGYAALKLDMAKAYDRVDWNFLELVLFKFGLDPVWVDRVMVCVRSVSFAVLLNGSPTEDFYPERGLRQGDPISPYLFLLVTEALSGLLRKAEMQGALYGVRICQGAHDHTPLLCR*

Click here to download the sequence:
Link to NCBI Protein BLAST