Transcript Information: R_Transcript_443100.p1


Annotated TAIR IDAT1G20696.2
Annotated Gene Namehigh mobility group B3
Annotated Gene Symbol(s)HMGB3, NFD3, NFD03
Annotation TypeHomolog
Chromosome Positionchr1:7179825-7181193 | Forward length=147
E-Value7E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25636181116178
Replicate 20
Replicate 30.064344768528518
Condition 2: 8 Hour
Replicate 10.13756103902947
Replicate 20.062811465846027
Replicate 30.25493835140993
Condition 3: 24 Hour
Replicate 10.064488222549731
Replicate 20.1858589232352
Replicate 30.12296463307246


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_443100.p1 GENE.R_Transcript_443100~~R_Transcript_443100.p1 ORF type:5prime_partial len:356 (+),score=99.09,HMG_box|PF00505.15|1.3e-15,HMG_box_2|PF09011.6|9.3e-12 R_Transcript_443100:1-1068(+)
GTAAAATGCAGTGTGACAATTGTGCAATCTGCTGATCAACCTGACAAGATTGATTTGAAAAAGAAGCTCATCATGAGAGGTTTACTAGAGATAGTACTAGGCTTCCTAGCATGTAAGATTCACATGCCCGTCAAAGAGAGGCAGGAAGCTGCAAAGTCATTGCTCGGTGTGTCAGTTCTCAAGAACGATGCGAACATACAAATCTGTTATCAGTTATCCATCAGTGATGATAGGTGTCTTGAGAGAGAAGTGGTGAAGTTGGTTCATTGGGATAGGAAATCTGAGCAGTTATTCGTTGACAGTGCATTTTCCAAAAATCTCAAGGCTAGTGCAGAGTTTGTGAATTTCTTTGCAGTGGAAATTGCTGAAGGATTACTGCCACAAGAAAGACCTGATATTGTAAATGACCTGCGGAATCTAATTCAGATGGGTTTTCTCTTGGAGTTTCAACAACAATCAGTTCACTTTTTGCTTACCAGAGAAAATGTAGAGATTTTGATGGAAGATGAGGAGTTCCTTGATGCTTCATTCCCGTTATCTGAATGGCTGCATGCCTCTGCTCGTGCTAAAAGGACATCTTCTCAGTTGGAGCAGCAATTGATTCCCTTGACACCTGTTAAATTCCAACGCTTCAAAAGAAGAGGATTGGATATGATAGCAGCAGCTGAGAAGGAAGTCAAAGTGGAACAGATCTCATCACAGAGCCATGGCAATGTGCTATCCAAGAAGAAAGTTTCTACTGAAAGGGGCACAGTAAAGGATCCTATCAAGCGGAAGAAGCCTGCTCCTGCTTTTTTCATCTTCATGGAGGAGTTCAGGAAGAAGTACAAAGTGGAGCACCCTGGCAGTAACTCGGTTGTCACTGTCTCTAAAGCTGGTTCAGAAGTATGGAGAGCTATGTCTGATCTTGAGAAGGTCCCTTACGTTGAAATGACACAGAAAAGGAAGGCTGAATATGAAGAAGAGTCGCAAGCATACGACAGGAAATTGAAGCCCGGAGGCAGAAGAGCACGTGTTAAGTTGGAGCTTCAGTCTGATGATAGCGACGAAGAGCATGAAGGGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_443100.p1 GENE.R_Transcript_443100~~R_Transcript_443100.p1 ORF type:5prime_partial len:356 (+),score=99.09,HMG_box|PF00505.15|1.3e-15,HMG_box_2|PF09011.6|9.3e-12 R_Transcript_443100:1-1068(+)
VKCSVTIVQSADQPDKIDLKKKLIMRGLLEIVLGFLACKIHMPVKERQEAAKSLLGVSVLKNDANIQICYQLSISDDRCLEREVVKLVHWDRKSEQLFVDSAFSKNLKASAEFVNFFAVEIAEGLLPQERPDIVNDLRNLIQMGFLLEFQQQSVHFLLTRENVEILMEDEEFLDASFPLSEWLHASARAKRTSSQLEQQLIPLTPVKFQRFKRRGLDMIAAAEKEVKVEQISSQSHGNVLSKKKVSTERGTVKDPIKRKKPAPAFFIFMEEFRKKYKVEHPGSNSVVTVSKAGSEVWRAMSDLEKVPYVEMTQKRKAEYEEESQAYDRKLKPGGRRARVKLELQSDDSDEEHEGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST