Transcript Information: R_Transcript_443166.p1


Annotated TAIR IDAT3G25690.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)CHUP1
Annotation TypeOrtholog
Chromosome Positionchr3:9354061-9357757 | Forward length=1004
E-Value1.4E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.55990134443462
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_443166.p1 GENE.R_Transcript_443166~~R_Transcript_443166.p1 ORF type:internal len:150 (+),score=37.27 R_Transcript_443166:1-447(+)
CAAGACCTGCTAAAATTAGAACACAAGGTTTCGTCGTTTACTGATGATCCAAAGCTTGCATGTGAAGAAGCTCTCAAGAAGATGTATTCCTTGCTTGAAAAAGTGGAGCAGAGTGTTTATGCGCTACTTCGTACTAGAGACATGGCCATATCACGCTACAGGGAGTATGGAATACCGGTGGATTGGCTGTCTGATTCCGGGGTAGTTGGCAAGATCAAATTGGCATCTGTTCAGCTGGCGAAGAAGTATATGAAGAGGGTTGCCACAGAGCTTGATGCCTTGCAAGGCACCGAGAAAGAGCCCAACAGAGAGTTCTTGCTTCTTCAGGGTGTGAGATTTGCTTTCCGAGTTCATCAGTTTGCCGGAGGGTTCGATGAGGAAAGCATGAAGGCATTTGAAGAGCTAAGAAGCAAGATGTCTACACAGACATCTGCTCCACAAATTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_443166.p1 GENE.R_Transcript_443166~~R_Transcript_443166.p1 ORF type:internal len:150 (+),score=37.27 R_Transcript_443166:1-447(+)
QDLLKLEHKVSSFTDDPKLACEEALKKMYSLLEKVEQSVYALLRTRDMAISRYREYGIPVDWLSDSGVVGKIKLASVQLAKKYMKRVATELDALQGTEKEPNREFLLLQGVRFAFRVHQFAGGFDEESMKAFEELRSKMSTQTSAPQIS

Click here to download the sequence:
Link to NCBI Protein BLAST