Transcript Information: R_Transcript_443330.p1


Annotated TAIR IDAT3G22630.1
Annotated Gene Name20S proteasome beta subunit D1
Annotated Gene Symbol(s)PBD1, PRCGB
Annotation TypeHomolog
Chromosome Positionchr3:8009709-8010774 | Reverse length=204
E-Value2E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19521883374031
Replicate 20.33683904411173
Replicate 30
Condition 2: 8 Hour
Replicate 10.26188090852669
Replicate 20.11957690824163
Replicate 30
Condition 3: 24 Hour
Replicate 10.12276902260804
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_443330.p1 GENE.R_Transcript_443330~~R_Transcript_443330.p1 ORF type:3prime_partial len:187 (+),score=26.83,Proteasome|PF00227.22|1e-36 R_Transcript_443330:5-562(+)
ATGGACAGCATTCTTGGATTTGTTGGAAAGGATTATGTTTTGATTGCAGCAGATACCAATCAAGCAAGATCCATCATTGTTATGAAGAAGGATCTCGACAAAATTACTGAATTGGACAGCTCCAAATTGATGTCTTGCGTCGATCTCTCTGCAGGAGATAGAGATCACTTTACCGAATACATCCAAAGAAATCTCAACTTCTATGAATTGAAAAATGATCAAAAATTGTCCACAAATGCAACCGCAAACTTCACCAGAAGAGAGCTTGCAAATGCATTGAGAAGCAGAAATCCATATTCCGTCAACATCTTGTTGGGAGGAGTTGATAACAATGTTCCATCTTTGTATTACATTGATTACCTTGCATCCTCTAACAAACTTAATTTCGGAGCTCACGGATACTGTTCATATTTTGTATCCTCCATCTTCGATAAGCACTGGAAGAAGGATATGACCTTGGAGGAGGGAATCAACTTGGTCAAGCTCTGCATCGCTGAGGTCCAAAGACGTCTCACCATCAACCAAGCAACCTTTACCATCAAAATTGTCGATAAAGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_443330.p1 GENE.R_Transcript_443330~~R_Transcript_443330.p1 ORF type:3prime_partial len:187 (+),score=26.83,Proteasome|PF00227.22|1e-36 R_Transcript_443330:5-562(+)
MDSILGFVGKDYVLIAADTNQARSIIVMKKDLDKITELDSSKLMSCVDLSAGDRDHFTEYIQRNLNFYELKNDQKLSTNATANFTRRELANALRSRNPYSVNILLGGVDNNVPSLYYIDYLASSNKLNFGAHGYCSYFVSSIFDKHWKKDMTLEEGINLVKLCIAEVQRRLTINQATFTIKIVDKE

Click here to download the sequence:
Link to NCBI Protein BLAST