Transcript Information: R_Transcript_443338.p1


Annotated TAIR IDAT5G06210.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1878497-1879515 | Forward length=146
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2704142363662
Replicate 20.077764075615919
Replicate 30
Condition 2: 8 Hour
Replicate 10.181376777387
Replicate 20.08281808089328
Replicate 30
Condition 3: 24 Hour
Replicate 10.17005783131633
Replicate 20
Replicate 30.32426229165774


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_443338.p1 GENE.R_Transcript_443338~~R_Transcript_443338.p1 ORF type:3prime_partial len:270 (+),score=80.06,RRM_1|PF00076.18|1.9e-18,RRM_1|PF00076.18|9.5e-15,RRM_6|PF14259.2|4.6e-13,RRM_6|PF14259.2|0.00012,RRM_5|PF13893.2|4.2e-08,RRM_5|PF13893.2|0.0066 R_Transcript_443338:75-881(+)
ATGGTTAGAACTAAGGTATTCGTTGGAAACTTGGACTTCCGTACTAGAGAAGCTGAATTAGCCAAGGCCTTCGCTGTTGCAGGAAAAGTCATCAGCGCCAACATCATCACCAGAGGCCCTCGCTCTTTGGGATATGGTTTCGTCGAATTCGACAATGAAGAAGACGCCAACAATGCCGTCAAGCAATTAAACAAGACCGAAGTTGATGGAAGACCAATCAACGTCGAAGTTGCTAAGGCCAGAGAAGAACTCCAACAACAACAACAAGCTCAATCCGACAACAAGGCCCAATCTGCCGATCAATCTGCCCCTGCTTCTGAAAACGCTGGACGTGGAAGAGGAGGACGTGGAGGCCGTGGTGGACGTGGAACCCGTGGTGCTCGTGGTGGAAGAGGTGCTCGCCGTGGAGGAGGAGTTTACCGTAAAGCTTCTGGAAAGGAAGAACAACAACCTGTTGCTGCTGAAAACAAGCCTCAACAACAACAAGCTCAAAAGCAAGAAAAGAAGGAAAAGGAGCCTGACAACAGAACCCCTTCCAAGACTTTGTTATTTGTTGCCAATTTGCCATTCAAGCTTGACGACAACACTTTTGGACAAATCTTCAAGGATGCTGGAGTCAACTTCAAGAATGCTTACGTTGTCAAGAACCAAAGAAGCGGAAGAAGCAAAGGTTTTGGTTTTGCCGAGTTTGAAAACGAAGCAGATCAACAAAAGGCTTTGAACGCTGTTAATGGAAAGACTGTTGAAGAACGTACTTTGGTTGTAAAGGTTGCTCTTACTGAAGCTCCTCAACCTGCCAAGAAGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_443338.p1 GENE.R_Transcript_443338~~R_Transcript_443338.p1 ORF type:3prime_partial len:270 (+),score=80.06,RRM_1|PF00076.18|1.9e-18,RRM_1|PF00076.18|9.5e-15,RRM_6|PF14259.2|4.6e-13,RRM_6|PF14259.2|0.00012,RRM_5|PF13893.2|4.2e-08,RRM_5|PF13893.2|0.0066 R_Transcript_443338:75-881(+)
MVRTKVFVGNLDFRTREAELAKAFAVAGKVISANIITRGPRSLGYGFVEFDNEEDANNAVKQLNKTEVDGRPINVEVAKAREELQQQQQAQSDNKAQSADQSAPASENAGRGRGGRGGRGGRGTRGARGGRGARRGGGVYRKASGKEEQQPVAAENKPQQQQAQKQEKKEKEPDNRTPSKTLLFVANLPFKLDDNTFGQIFKDAGVNFKNAYVVKNQRSGRSKGFGFAEFENEADQQKALNAVNGKTVEERTLVVKVALTEAPQPAKKP

Click here to download the sequence:
Link to NCBI Protein BLAST