Transcript Information: R_Transcript_443747.p1


Annotated TAIR IDAT3G28880.1
Annotated Gene NameAnkyrin repeat family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10892435-10895895 | Forward length=772
E-Value1.5E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4040368961331
Replicate 20.24605039550349
Replicate 30.32809129369489
Condition 2: 8 Hour
Replicate 10.095647909950177
Replicate 20.17469438938426
Replicate 30.16544436763373
Condition 3: 24 Hour
Replicate 10.089678934483219
Replicate 20.14358892506886
Replicate 30.22799692382185


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_443747.p1 GENE.R_Transcript_443747~~R_Transcript_443747.p1 ORF type:5prime_partial len:768 (+),score=161.99,Ank_4|PF13637.2|0.00031,Ank_4|PF13637.2|1.8e-05,Ank_4|PF13637.2|0.52,Ank_2|PF12796.3|7.4e-06,Ank_2|PF12796.3|1.5e-08,Ank_5|PF13857.2|2,Ank_5|PF13857.2|0.0044,Ank_5|PF13857.2|0.017,OST-HTH|PF12872.3|2.7e-11,Ank_3|PF13606.2|28,Ank_3|PF13606.2|15,Ank_3|PF13606.2|0.11,Ank_3|PF13606.2|0.69,RRM_1|PF00076.18|1e-09,RRM_1|PF00076.18|1.4e+03,Ank|PF00023.26|3.9,Ank|PF00023.26|19,Ank|PF00023.26|20,Ank|PF00023.26|0.59,RRM_6|PF14259.2|2.3e-08 R_Transcript_443747:3-2306(+)
AAACTGCTACTTAAAGAGATGGAGCTGCTACATTTCTTTGGGGCGTCACCTAGTACCAGCTGTGGGGACAAGAAAGTCACATCTCCTCTTATTCTTGCTTCCCAGGTTGGAGATGAAGCAGTGGTGAAGCTACTACTGAAGACAGACATAGATGTAAATGATGCTGACGCCGAGGGTAATTCTGCCCTTCATTGGTCTCTTAAAGTGTGTAAAGTGCCAAACCCAGAGCATATCAGGATCATGTGCCTTCTACTGAAGCATGGTGCTCGAGTGAGGCAAAAGAATATGCTGGGATTAACTGCAGTTCACATAGCTGCCAGTAATGGAAATTTCCAAGCACTTGAGATTCTACTATTACAGGACCCTGACAGTGTCTACATGACATCAGAGCTCAAAGAAACTCCTCTTTTTTCGGCAGTAAAGAATGACTCTATAGAGTGTGCTCAACTTCTACTACGTTTCGGAGCAACCACAGATGTCCATAACTTGCGTCGAGAACGTCCTATAGATGTGGCAAAATCACAAGACATGCGCTCTGCTTTAAGCTGCACCAGTATTATCATAACCAGTAGGGCCTCCCAACAAAAATACACTGCACGTGTAAACAATGATGAAGTTATCTCAGAAACCTGTGAGATGCTTCTAAAGGAAGCATACCCTTCATCTGAGAGTGCTGGCTCAAGTGGAGACAGTGAAATCTGCAAATACTACGCATCACCAACAGGATGTGTTAGAGGGTCTAAGTGCTTCTACAAGCATGGTGAAGAGGAAACCTCCAATTTGAAATCAAGAGTGGGCTTTGTCCGTTCTGTAGCTCTAGAGGAATTCAAGCGAAAGATCTTTGTAGGGGGACTGCCACCTACTTTGGACTCCGAGTCATTGGCACGTGTGATGGAAGAGGAATTTGGACCTGTGGTGGACGCCAAGGTTTTAGAGATTGAAGTTGATGGTCAAGTTGTATCCCGTGGGTTTGGCTTTGTTAACTTCAAGCATGAAGAATCAGTTGCTGCTGCTGTGGAGGCTCACTATGTCAACATATGGGGAAAGAGAGTTGAGATGAAAAGTGCTATCCCAAAGTGCTTGCTGCCAAAAGAGGACCATCTAGATGAACCTCAGCAACAGACCGAGCAAAAAGAGAACAGGCAGCCCCAATCACCAAGCCGTGAGACTAGTGCAGGTGAGGATATACCTGAGCAAAAATCTTGGGCTGATCGAGTATCCCAAGGGCAGCCAGCACAAACAGTGAAAGAGCTCAAGACCCACAGGACACTGTCGACTGGTCGTGAAATGCCTGCATGGTTTAAAACCTTGAAGAAATGGCTTCCTCAATTCTTAAGAAAGATGTCCAAGAATTCAAAAGACGGAGAGTTCTATTCTCTCTCATCTTTGAAAGCTGATTTCAAGGCAATATTTGGCATTGAGCTGGACCACACTTCTCTTGGCTACTCTAAGCTCAGTGATTTCATAAAATCTGTCCCTCAGTTGTGTAGTATAAAGATTGTCCATACAGGTGGGCAAGTTCCTAATCACATGATCCTCTTGCCTAGCGTTTCACGGCCTCTACCACTGGTTATCCCAAAGAATGATGTTCGTGTGCCTTGCCCTGCAACACCAGTCCATGAACAGAATGATGATGGTCTTGAAAACCTGAAGTTTCACGAGGTCTTGCTGCCTTCATACTGTGAAAAAAATGTTCTGATCAAAGAAGAATCTAAAAGAGATGCTAACTCCAATAAGAGTTCTCAGATAAATATTGAGAGTACTGGAGTGAACAAGGTAAATGGCAAGATAGGTTTGGGAACTTACCCTAATTGTAGCACTACAGTTCCTCCACAGCTCCGTAGCTTCCTACAGTTTTTGGAACCAGACCCTGTTTTTCTTGGTCGTACATGGCTAGGGACTGGAGGCTTCAAGACATTGGATGATCCCTACAGGCCAAGGCATTTGGTTTTGGAGGCTCTTGCCCGTAAGAGGAAAGAGGTCTTCTTACTTAGGGGCCTCAAATTCTATGAAGACTATGCAGCTAGCCTCAAGCAAAACACCTGTTTTGCTTGTGGAAAGAACAAGATGCTATGGGCCAACTACCCTTGCCAACATCTTTTGTGGTGTGGTGATTGCAAGCTTATTGCCACGAGGGTTGCTGCTGTTGGCACAAGTAGTCATAAGTGTGTGTTGTGTGATCGTCTGGTGGAAAACATTGACTTGATAACACAGACTAGAATGCAGCAGCAAATCCACAATGGATCGCTGGATTTCCCGCCCATTCACACTGCTTATTTGAGGAGTCAAAGGCTCCAAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_443747.p1 GENE.R_Transcript_443747~~R_Transcript_443747.p1 ORF type:5prime_partial len:768 (+),score=161.99,Ank_4|PF13637.2|0.00031,Ank_4|PF13637.2|1.8e-05,Ank_4|PF13637.2|0.52,Ank_2|PF12796.3|7.4e-06,Ank_2|PF12796.3|1.5e-08,Ank_5|PF13857.2|2,Ank_5|PF13857.2|0.0044,Ank_5|PF13857.2|0.017,OST-HTH|PF12872.3|2.7e-11,Ank_3|PF13606.2|28,Ank_3|PF13606.2|15,Ank_3|PF13606.2|0.11,Ank_3|PF13606.2|0.69,RRM_1|PF00076.18|1e-09,RRM_1|PF00076.18|1.4e+03,Ank|PF00023.26|3.9,Ank|PF00023.26|19,Ank|PF00023.26|20,Ank|PF00023.26|0.59,RRM_6|PF14259.2|2.3e-08 R_Transcript_443747:3-2306(+)
KLLLKEMELLHFFGASPSTSCGDKKVTSPLILASQVGDEAVVKLLLKTDIDVNDADAEGNSALHWSLKVCKVPNPEHIRIMCLLLKHGARVRQKNMLGLTAVHIAASNGNFQALEILLLQDPDSVYMTSELKETPLFSAVKNDSIECAQLLLRFGATTDVHNLRRERPIDVAKSQDMRSALSCTSIIITSRASQQKYTARVNNDEVISETCEMLLKEAYPSSESAGSSGDSEICKYYASPTGCVRGSKCFYKHGEEETSNLKSRVGFVRSVALEEFKRKIFVGGLPPTLDSESLARVMEEEFGPVVDAKVLEIEVDGQVVSRGFGFVNFKHEESVAAAVEAHYVNIWGKRVEMKSAIPKCLLPKEDHLDEPQQQTEQKENRQPQSPSRETSAGEDIPEQKSWADRVSQGQPAQTVKELKTHRTLSTGREMPAWFKTLKKWLPQFLRKMSKNSKDGEFYSLSSLKADFKAIFGIELDHTSLGYSKLSDFIKSVPQLCSIKIVHTGGQVPNHMILLPSVSRPLPLVIPKNDVRVPCPATPVHEQNDDGLENLKFHEVLLPSYCEKNVLIKEESKRDANSNKSSQINIESTGVNKVNGKIGLGTYPNCSTTVPPQLRSFLQFLEPDPVFLGRTWLGTGGFKTLDDPYRPRHLVLEALARKRKEVFLLRGLKFYEDYAASLKQNTCFACGKNKMLWANYPCQHLLWCGDCKLIATRVAAVGTSSHKCVLCDRLVENIDLITQTRMQQQIHNGSLDFPPIHTAYLRSQRLQA*

Click here to download the sequence:
Link to NCBI Protein BLAST