Transcript Information: R_Transcript_44377.p1


Annotated TAIR IDAT1G79540.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29920334-29922676 | Reverse length=780
E-Value8E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3463761750318
Replicate 23.1494450624447
Replicate 33.8177895993587
Condition 2: 8 Hour
Replicate 11.7684235795233
Replicate 22.6087695481383
Replicate 34.2353758114236
Condition 3: 24 Hour
Replicate 13.8263012046174
Replicate 22.6956427532928
Replicate 33.1615573436629


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44377.p1 GENE.R_Transcript_44377~~R_Transcript_44377.p1 ORF type:3prime_partial len:180 (+),score=26.66 R_Transcript_44377:346-882(+)
ATGAAGATCGTTACTGTGATTCAAAGACTCACCATTTTGAGGCCATTTTCATCATCCTCATATAAAATATCCAACTTATTCACAGAAAAGCCAGACCCTTTAACTCAAATCATCCATATTCTTAGAAATTCTGACCCAATTGAACCTGCTCTTAACCGGGTTGCCTATATTGTAAATCCGGGTATAATCTCATCAGTTATGATGAACCCACCAAATACTCAACTGGGTTTTCGTTTTTTCATCTGGGCAATGAAGAAAAAGTCTTTTGGAACTTGGAAGTTGAGTGATTTGGTCATTGACATGGTGTTGAGAGAAAATGGTGGGATTGAACTTTGGTGGGAAACCCTTGAAGAACTTAGAAGATGTGGAGCTAAAATACCATCTGATGCTTTTTATGTATTGATTTCTGCTTATTGGAAGGCTGGCAATGCTGAGAAAGCTGTAGAATTATTTGGACGGGGAAAGGAAATTCTCAAGAAGAAGGAGAGAGGAACGCAAACGGAATGCCTGGTCATGGGGCACTGCTGGTCATCTGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44377.p1 GENE.R_Transcript_44377~~R_Transcript_44377.p1 ORF type:3prime_partial len:180 (+),score=26.66 R_Transcript_44377:346-882(+)
MKIVTVIQRLTILRPFSSSSYKISNLFTEKPDPLTQIIHILRNSDPIEPALNRVAYIVNPGIISSVMMNPPNTQLGFRFFIWAMKKKSFGTWKLSDLVIDMVLRENGGIELWWETLEELRRCGAKIPSDAFYVLISAYWKAGNAEKAVELFGRGKEILKKKERGTQTECLVMGHCWSSV

Click here to download the sequence:
Link to NCBI Protein BLAST