Transcript Information: R_Transcript_443790.p1


Annotated TAIR IDAT5G11880.1
Annotated Gene NamePyridoxal-dependent decarboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3827806-3829942 | Reverse length=489
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22067483019522
Replicate 20.14505216177063
Replicate 30
Condition 2: 8 Hour
Replicate 10.084579844377358
Replicate 20.15447932187348
Replicate 30.12539972794741
Condition 3: 24 Hour
Replicate 10.515460265907
Replicate 20.22855190560184
Replicate 30.52923638275745


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_443790.p1 GENE.R_Transcript_443790~~R_Transcript_443790.p1 ORF type:3prime_partial len:579 (+),score=16.99,Orn_Arg_deC_N|PF02784.12|2.3e-68,Orn_DAP_Arg_deC|PF00278.18|1.1e-24 R_Transcript_443790:149-1882(+)
ATGAAAAAACCCACAGCAACCAAAAACACCCCAAAAGTAAACTCTAAAGACAACACCTTCGATATCTCCATAGATATTGAATCAAAGTTAAGCAACAGCCTTGTGTTATCCTCCAATGTTGTTTTCCATAAGAAAGGAAAGAAAGTAAAAGACGTAAAAATCAGCAAAAATGTTAAATCAAAAGAACGAAAAGCAAAACGTGTGAATAATCACAAGAAGAAAGGTTCGGGAACCACAAACCACAACCACAAGAAGAAGAAACTTTTACGACTCCATCCAGATATCGTAGAAGTGAGTACTTGTGCAGTTGATGTGCTCGAGTGCAAATCTGACTTGGATGAACAATATCTCCGACTCAAAGAGCAAGTCCTCGCGCGCATCCCCAACCCCGAATCTCTTGTGCATATTAATCACGGTACTACTTTGGAAACACGAATTACAAATATCTTTGATAGTAACCCCGAATTGAACAACCTCTACCTTGTCGATTTGACCACTGTTATTATCAAATACAAAGATTGGGTAAACGTCCTTCCCAACGTGGAGCCCTTTTATGCAATGAAGTGCAATCCCGATGACAAAATCGTCAGCACACTCGTGGCGTGTGGAGCAGGTTTGGATTGCGCCAGTATGCAGGAAATGAAAGTCGCTCTCTCGAAAGGTCTCGATGGCAGCAAAATCATCTTTGCCAACCCCTGCAAAATGCCCGCCCACATCAAATTCGCTAAAGACAACGGCATCGAAATGATGACGTTCGATAATAAGAACGAGCTTCAAAAGGTGCACGAGATATTCCCCACCGCCAAGATGGTGTTGCGTATTCTCGGAGATGACTCTCACTCCACCATGCGCTTTGGCTCCAAATTCGGTGCCAATGTGCTCACCGAAGCGAAACCTCTTCTCGAATATGCCTATTCCTTGGGCTTACAAGTGATCGGTGTGAGCTTCCACGTGGGCAGCGGTTGCCAATCTGCTGAGGCGTACACCAACTCCCTTCGATTGGCCCGCACTGTCTTTGACTTTGCGGAACAGCTCGGCCACCCAATGACCCTCCTCGACATCGGAGGCGGCACCCCCGGCGTGGACACAGATGATTTGAGGTTTGGAGAAATCGCCAAAACGATCGCCAAAAACCTCGAGGAGATGTTCTCTCCCGATGTGCGCGTCATCGCCGAGCCCGGTCGCTATTTCGCCAGTGAATGCGTAGTTTTGGTTACCAGCGTTATTGCCAAGCGCGAGCGAGTAATCCCCGCTGACGAACAATCCGAAGGCGCCGATTTGATCAAGAAGATTGACTACTACATCTCCGATGGTGTGTATGGCTCCTTCAACAACTTGTTCTTTGATCACGCTCTCGCCCAGCCTATTCCCATGCAACGAGCGAGAAAGCAAGTGGAGGACACCCCCGATGCCACCGATCTCCCCTCCAACTCCCCCTCTAACTCCCCCGACCGCTGTTCATCTGAGGATAGCGATCCCAACCTCTATTGCTCTTCCCCTCCCAAGGAAGTGGCTTGCGGTTCGCCCCCCAAGGACTCACACAGCGGCGGCTCTCCTCCTCTCGGTGATACCCTCAAATCCCGAAGCACTGTCTTCGGCCCCACCTGCGACTCGATCGATTTGGTTTGTAAAGACGTTGAATTGCCCGACTTAGAGATTGGCGATATCGTTTACTTCTTCAACATGGGTGCTTACACCTCTGCTGCTGCTTCCTCCTTTAATGGATTTAATCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_443790.p1 GENE.R_Transcript_443790~~R_Transcript_443790.p1 ORF type:3prime_partial len:579 (+),score=16.99,Orn_Arg_deC_N|PF02784.12|2.3e-68,Orn_DAP_Arg_deC|PF00278.18|1.1e-24 R_Transcript_443790:149-1882(+)
MKKPTATKNTPKVNSKDNTFDISIDIESKLSNSLVLSSNVVFHKKGKKVKDVKISKNVKSKERKAKRVNNHKKKGSGTTNHNHKKKKLLRLHPDIVEVSTCAVDVLECKSDLDEQYLRLKEQVLARIPNPESLVHINHGTTLETRITNIFDSNPELNNLYLVDLTTVIIKYKDWVNVLPNVEPFYAMKCNPDDKIVSTLVACGAGLDCASMQEMKVALSKGLDGSKIIFANPCKMPAHIKFAKDNGIEMMTFDNKNELQKVHEIFPTAKMVLRILGDDSHSTMRFGSKFGANVLTEAKPLLEYAYSLGLQVIGVSFHVGSGCQSAEAYTNSLRLARTVFDFAEQLGHPMTLLDIGGGTPGVDTDDLRFGEIAKTIAKNLEEMFSPDVRVIAEPGRYFASECVVLVTSVIAKRERVIPADEQSEGADLIKKIDYYISDGVYGSFNNLFFDHALAQPIPMQRARKQVEDTPDATDLPSNSPSNSPDRCSSEDSDPNLYCSSPPKEVACGSPPKDSHSGGSPPLGDTLKSRSTVFGPTCDSIDLVCKDVELPDLEIGDIVYFFNMGAYTSAAASSFNGFNP

Click here to download the sequence:
Link to NCBI Protein BLAST