Transcript Information: R_Transcript_44381.p1


Annotated TAIR IDAT3G62980.1
Annotated Gene NameF-box/RNI-like superfamily protein
Annotated Gene Symbol(s)TIR1
Annotation TypeHomolog
Chromosome Positionchr3:23273479-23276181 | Reverse length=594
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.840013912975
Replicate 26.3350906428485
Replicate 39.2021894136267
Condition 2: 8 Hour
Replicate 18.5700527315358
Replicate 212.105718789883
Replicate 317.838651816587
Condition 3: 24 Hour
Replicate 113.299695221567
Replicate 211.483945146473
Replicate 312.642036327777


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44381.p1 GENE.R_Transcript_44381~~R_Transcript_44381.p1 ORF type:complete len:580 (+),score=126.19,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|14,LRR_4|PF12799.3|4,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|1.9,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|37,F-box-like|PF12937.3|1.3e-06,F-box-like|PF12937.3|8.6e+03,F-box-like|PF12937.3|3e+02 R_Transcript_44381:153-1892(+)
ATGGTTTCAAAGAAGAGTAAAGATTCAGAATCTGGGAAAAAGATCACATCTTTCCCAGATGAAGTATTGGAAAAAGTTTTAGGCTTGTTAGAATCCCACAAAGATAGAAGTTCAGTTTCATTGGTATGCAAAGATTGGTATAATGCTGAAAGATGGAGTAGAACCCATGTATATATAGGCAATTGTTATGCAGTTTCACCTGAGATTGTTGCAAATAGATTCCCAAATATTAGGAGTATTTCGTTAAAAGGGAAACCCAGGTTTGCAGATTTCAGTTTGGTGCCTGATAATTGGGGTGCTCATATTCATCCTTGGCTTGTTTGTTTTGCAAAAGCTTACCCTTTTCTTGAAGAGCTTAGGTTGAAAAGGATGTGTTTGAGTGATGAAAGCTTGGAGTTTTTGGCTTTGTCTTTTCCTAACTTCAAGAGACTTTCCCTTCTTAGTTGTGATGGTTTCAGCACTGATGGCCTTGCTGCTATTGCCTCTAATTGCAGGAACTTAGTTGAGCTGGACATTCAGGAGAATGGAATTGATGATCGTAGTGGCAGTTGGCTGAGTTGCTTCCCTGAAAGCTTCTCATCATTGGAAATACTGAATTTCTCAAATCTCCACTCTGAAGTCAGTTTTTCTTCCCTGGAGAGGCTTGTAGCAAGGTGCAAATCTTTGAAGGTGTTGATGGTCAACAAAAGTGTTGATCTTGAGCAGTTACAGAGATTGCTTGTACATCCTCCTAAGTTGACACAGCTTGGCACCGGAACCTTCTCACAGGAGCTTCAACCTAGCCAGTATGCAAGCCTTGAAAGTGCATTTAACAACTACAGGAGTCTTCACACTCTCTCTGGTTTATGGGAGGCCAATTCACTGTATCTGCCTCTTCTGTATCCTGCCTGTACAGGGCTGACATTTTTGAATTTGAGTGATGCACCTTTACAATGTGATGAACTTGCTCAACTTCTTGCTCACTGCCCAAATCTCCGGTGCCTTTGGGTGCTGGATACTGTTGGGGACAAAGGCCTGGAGGCTGTTGGATCCAGCTGCCCATTGCTTGAGGAACTCCGAGTATTTCCCGCAGACCTTGACCCTGAAATAATCCACGGTGTTACTGAGTCTGGTTTTGTTGCGGTGTCATATGGATGCCCCAAACTCCATTATGTCCTCTACTTTTGCCGGCAGATGACAAATGCTGCTGTGGCAACCATTGTGAAGAACTGTCCAGATTTTACTCACTTCCGTCTCTGCATAATGGTTCCTGGCCAATCAGACCACTTGACTAATGAACCAATGGATGAAGCTTTTGGTGCAGTGGTGAAAACTTGTAAGAAGCTTAGAAGACTAGCAGTCTCTGGCTTATTGACTGATGTGACATTTGAATATATTGGGAAATACGCCAAGAATCTGGAGACCCTTTCTGTGGCATTTGCTGGAAGTAGTGACTGGGGTATGCAATGTGTTCTCCAGGGCTGTCCTAAGCTGAGACGGCTGGAAATAAGGGATTGTCCGTTTGGCAATGCTGCGCTTCTTTCAGGCTTGGACAAATATGAATCGATGAGGTCCCTGTGGATGTCAGCGTGCCATGTAACCATGGGTGCCTGTAGGCTGTTGGCAGATAAAATGCCACGGTTGAATGTAGAGGTGATTAAGGATGAAGATAGTGACGGCTGTCATGCTAATAAAGTTTATGTCTATCGTTCTGTGGCTGGACCAAGACAGGATGCCCCACCATTTGTTCTCACACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44381.p1 GENE.R_Transcript_44381~~R_Transcript_44381.p1 ORF type:complete len:580 (+),score=126.19,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|14,LRR_4|PF12799.3|4,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|1.9,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|37,F-box-like|PF12937.3|1.3e-06,F-box-like|PF12937.3|8.6e+03,F-box-like|PF12937.3|3e+02 R_Transcript_44381:153-1892(+)
MVSKKSKDSESGKKITSFPDEVLEKVLGLLESHKDRSSVSLVCKDWYNAERWSRTHVYIGNCYAVSPEIVANRFPNIRSISLKGKPRFADFSLVPDNWGAHIHPWLVCFAKAYPFLEELRLKRMCLSDESLEFLALSFPNFKRLSLLSCDGFSTDGLAAIASNCRNLVELDIQENGIDDRSGSWLSCFPESFSSLEILNFSNLHSEVSFSSLERLVARCKSLKVLMVNKSVDLEQLQRLLVHPPKLTQLGTGTFSQELQPSQYASLESAFNNYRSLHTLSGLWEANSLYLPLLYPACTGLTFLNLSDAPLQCDELAQLLAHCPNLRCLWVLDTVGDKGLEAVGSSCPLLEELRVFPADLDPEIIHGVTESGFVAVSYGCPKLHYVLYFCRQMTNAAVATIVKNCPDFTHFRLCIMVPGQSDHLTNEPMDEAFGAVVKTCKKLRRLAVSGLLTDVTFEYIGKYAKNLETLSVAFAGSSDWGMQCVLQGCPKLRRLEIRDCPFGNAALLSGLDKYESMRSLWMSACHVTMGACRLLADKMPRLNVEVIKDEDSDGCHANKVYVYRSVAGPRQDAPPFVLTL*

Click here to download the sequence:
Link to NCBI Protein BLAST