Transcript Information: R_Transcript_4440.p1


Annotated TAIR IDAT3G26750.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9840139-9841719 | Reverse length=526
E-Value8.5E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2967736553991
Replicate 22.452122676356
Replicate 32.6334388112365
Condition 2: 8 Hour
Replicate 13.3511676478894
Replicate 23.8356257172837
Replicate 35.4984805893873
Condition 3: 24 Hour
Replicate 14.9853632483518
Replicate 24.6686314439908
Replicate 35.9112779081401


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4440.p1 GENE.R_Transcript_4440~~R_Transcript_4440.p1 ORF type:complete len:548 (+),score=88.39,HECT_2|PF09814.5|1.3e-16 R_Transcript_4440:298-1941(+)
ATGCCGCCAGAAAGCCCTAGAAAATGGAACTACACATGGGAAGCTCAATCTCACCTCCCAATCATCAAACTCTTCCTCTTCAACTCCCAAATCAATCCAACCTCTTATTGCGACAATCTTCAAGCCGATTTAAAGTTCGAAAAATCACTGATAAAACTAACTTGGAAAGAGCTAGTACCTCCAAACCAAGTCTCAGTCGTCGTTCCACTCCCTAGGGTTTTGGTGGACCTCGATTCTCCGGTGAATTGCAGAGCCTTAAATGACCATATAGAGGTCAAGATTGCTTTGTTACTCCCGGTTGATCATCCTATAGTTTCTAGCTTCATTTCTGAACTTAATTCTGGAGATGAAGCAGGTCCTTGTGGTTCCTCAGGCCGGTATCTGGAGCCGCTTTCGATGGAGTCTGATTTCAAGAATTTGTCTTGTAAAGGAGATGTGGACATCTATTGCAGGAATTGTGCGTTTAAGTTGACTAAAGGTCCTATTAGGTGTTTGGTGGACCTGCCATCAGTTAACTGGACAGATGTAGCTGACAACTGGTTTGGTGGTTGCTGTTGTTCATTTGGTGGGATAAGTGAGAAACTGGTGGCTAAGTATGTCAAATCTTATAGATGTGCCGAGGGGACTTGCTTATTAACTACTGCCTCTGTCATTATCTTTAAGGATGATGTTTCTTGTTTTATGTCACCAAAGGTGGATCAGACTATAAAATCCAACCACAGTGGCTCCACTGACAAGACATGTTCTTCTGAGGATGCTGATGCGAGGGTGTGTCATTCTACTGAAAGTGCCATAGTGCACTCAACGCAATCTCAAATAGATAATAATGTGGTCTCTGGAGGCTGTACACCACCTGATGATCACAGTAGACAGAAATCATCTGGTACTTCCCCTGGACATGATTATTCTGAACATGCATCTGAACATCAATGTTGTGCACATGGTGATGCTGAATCTGCTCTTGAGGACCAAGCTATCAGGGCACCAAATGGTCTGCTAGCTGATCAGAAGTCATTTCTTAATTGCTATCTTGGAACTGGTTTTTTGTTCAGATCATCTGGCCTTTCAAAAGATATTGAATGGATTGATTTCTCATGTCCTCAGTGCTCTGTTATCATGGGTGCATACCCTTGTGCTCATGACTCTGAACCATTAGATGGTGGCATCCGGCTGCTGAAATGTTACATCACAATTTCTCCTCCCTCTGACTCATCGGATGACTTGTTCAGCAAGTATACATTGGAGAGAATGTTCACCTGTCAGCTCTTGGAAAGCGCTAAAGATGAATTATCCTTCCGGACTGTTGTTAAGGATCTGAAGACGAAGTCTCCAATATTGCATATAGTTCTCCTTAATCCAAATTCATGGTGTTGTTTTGGCGATTGCTTGGAGGGTGCTCCTGAACAGCTTGTAAAGGTCAACTTGCACCCTGTTGTTAAGGTGCTTTTTTCTCATTGCTGCAATGGCAAGGAATATGAGCTAAGTATGACTCAGGATTGGGAAACAAAAAACCGTGCTGATGAAATTTACATGTCGTCCAACGTGAGTAATGAGCTGATCAAATCACTTGAGAGAGCAAAAGACACATTTCCACCATCGTTTAGCTCCTCGGAGGGATTTCTACTATCGTCCATCCTGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4440.p1 GENE.R_Transcript_4440~~R_Transcript_4440.p1 ORF type:complete len:548 (+),score=88.39,HECT_2|PF09814.5|1.3e-16 R_Transcript_4440:298-1941(+)
MPPESPRKWNYTWEAQSHLPIIKLFLFNSQINPTSYCDNLQADLKFEKSLIKLTWKELVPPNQVSVVVPLPRVLVDLDSPVNCRALNDHIEVKIALLLPVDHPIVSSFISELNSGDEAGPCGSSGRYLEPLSMESDFKNLSCKGDVDIYCRNCAFKLTKGPIRCLVDLPSVNWTDVADNWFGGCCCSFGGISEKLVAKYVKSYRCAEGTCLLTTASVIIFKDDVSCFMSPKVDQTIKSNHSGSTDKTCSSEDADARVCHSTESAIVHSTQSQIDNNVVSGGCTPPDDHSRQKSSGTSPGHDYSEHASEHQCCAHGDAESALEDQAIRAPNGLLADQKSFLNCYLGTGFLFRSSGLSKDIEWIDFSCPQCSVIMGAYPCAHDSEPLDGGIRLLKCYITISPPSDSSDDLFSKYTLERMFTCQLLESAKDELSFRTVVKDLKTKSPILHIVLLNPNSWCCFGDCLEGAPEQLVKVNLHPVVKVLFSHCCNGKEYELSMTQDWETKNRADEIYMSSNVSNELIKSLERAKDTFPPSFSSSEGFLLSSILR*

Click here to download the sequence:
Link to NCBI Protein BLAST