Transcript Information: R_Transcript_444127.p1


Annotated TAIR IDAT5G56680.1
Annotated Gene NameClass II aminoacyl-tRNA and biotin synthetases superfamily protein
Annotated Gene Symbol(s)SYNC1, EMB2755, SYNC1 ARATH
Annotation TypeOrtholog
Chromosome Positionchr5:22936645-22938841 | Forward length=572
E-Value1E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.094574927226522
Replicate 20
Replicate 30.11868775956556
Condition 2: 8 Hour
Replicate 10
Replicate 20.11585949140511
Replicate 30
Condition 3: 24 Hour
Replicate 10.35685710716639
Replicate 20.11427595280092
Replicate 30.11340779630517


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_444127.p1 GENE.R_Transcript_444127~~R_Transcript_444127.p1 ORF type:5prime_partial len:193 (+),score=-9.07,tRNA-synt_2|PF00152.16|7.2e-42 R_Transcript_444127:2-580(+)
GAAGATAAGAAAGAGAAAGAAAAGGGAGCGCAGGAAGCGAACAAACGAACGTTCACCGAAACGTCCGTCGTTCGTGTTTCATCGATTGTTAAAAATGAGTTTAAACGAATTTCATACACGGAAGCGATCGAAGTTCTCCTCAATTCGGGTAAAGAATTTGTTAACAAAGTGGAGTGGGGCATCGATTTGGCGTCTGAGCACGAACGATATTTAGCGGAAGTGATTTTCAACTCGCCAACGATTGTTTATAATTATCCAAAAGATATCAAAGCGTTTTACATGCGACAAAACGAAGACGGAAAAACCGTTTCCGCGATGGACATCCTCGTTCCACAAATCGGTGAATTAATCGGTGGAAGTCAAAGAGAGGAACGCTTCGATGTTCTTTCAAATCGCATCACTGAATTAGGAATGGACGTTCGCGATTTTTGGTGGTATTTGGATTTAAGAAAATACGGATCGGTGATCCACTCCGGCTTTGGCCTCGGCTTTGAACGTTTGATTATGTTTGTCACCGGAATGGAGAATATTCGCGATGTCATTCCTTTCCCTCGAACTCAACTTTCCGTCAACTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_444127.p1 GENE.R_Transcript_444127~~R_Transcript_444127.p1 ORF type:5prime_partial len:193 (+),score=-9.07,tRNA-synt_2|PF00152.16|7.2e-42 R_Transcript_444127:2-580(+)
EDKKEKEKGAQEANKRTFTETSVVRVSSIVKNEFKRISYTEAIEVLLNSGKEFVNKVEWGIDLASEHERYLAEVIFNSPTIVYNYPKDIKAFYMRQNEDGKTVSAMDILVPQIGELIGGSQREERFDVLSNRITELGMDVRDFWWYLDLRKYGSVIHSGFGLGFERLIMFVTGMENIRDVIPFPRTQLSVNF*

Click here to download the sequence:
Link to NCBI Protein BLAST