Transcript Information: R_Transcript_44430.p1


Annotated TAIR IDAT4G23940.1
Annotated Gene NameFtsH extracellular protease family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12437108-12441841 | Forward length=946
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.55430194739
Replicate 26.5918617586052
Replicate 38.3539370725926
Condition 2: 8 Hour
Replicate 17.1697511526289
Replicate 28.9112605223329
Replicate 311.762090180018
Condition 3: 24 Hour
Replicate 110.920732825018
Replicate 29.2324339541951
Replicate 310.666207040866


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44430.p1 GENE.R_Transcript_44430~~R_Transcript_44430.p1 ORF type:complete len:946 (+),score=197.53,AAA|PF00004.25|3.1e-42,AAA|PF00004.25|2.5e+03,Peptidase_M41|PF01434.14|2.6e-18 R_Transcript_44430:188-3025(+)
ATGTGCACAAGGGAAACCCTTTTACCAGCTAGGGTTTATCAACCCTTTCCAGTCACCAACATTAGTACCATTACCAGGTCAGGTATCATCTCAATTCACATTAGAAAACCCTCAAAAAAGCAACTCAAAACCCCCAAGAACTCAAATCTTGGAGCTCTCCTATTTACTCGTAGTAGAAAACCCACAATTTTATGCCAATCAAATGTTGATGGTGCAACAAACTCAAACTCTGATGATTTTGTAACTAGGGTTTTGAAGGAAAACCCAACCCAAGTGGAACCCAGGTTTCAGGTTGGTGATGAAGTCTATACTTTGACTGAGAGAGAGAGATTGAACAACAAAGGGTCTGGTTTTGGAGCCTTTGAGTTGTTAAAGAGGCTCAATTTGAAGGCGGATAAGGAGAAAGGGGGTCAGAATTTGGAGGGTAATGTTTATTTGAAAGATATATTGAGGGAGTATAAAGGGAAACTTTATGTACCTGAGCAAGTATTTGGTGCAAATTTGTCTGAAGAAGAGGAATTCAATAGGAATTTTGAGGAATTGCCTAAAATGAGCTATGAGGAGTTTGTGAAGTTTATGAGAAGTGATAAAGTTAAGCTGCTAACTTTAAAAGAGCAGGGTGAGGTTATTTCAGGTAGTGGGTTTAGGGATTTTATTGTTGAGTTGAAAGAATCTCCTGGGGATAAGAGCTTGCATAGAACTAAATGGGCAATGAGGTTGGGAGCTGATGAAGCTCAGGTGCTCTTGGATGAGTACACTGGTCCTCAATATGAAATAGAGACACGAATGACGTCACGGGTTGGAAAACTGCCCAGCTATCCTAATCCTGTTGCATCATCCATATCAAGCAGAATCATGGTTGAATTTGGGATGCTTTCAATTGTTCTGGCAGCTGCTGCAGCTGTTGTTGGAGGATTCATTGCTTCAGCTGTTTTTGCAGTCACAAGTTTTGTTTTTGTTGCCACTGTATACATTGTCTGGCCTGTAGTCAGACCTTTTCTCAAACTCCTCTTAGGCATTGTATCAGGAATTGCTGAGAGAGTTTGGGATTACCTTGTTGATATTTTCTATGATGGAGGTATATCTGCCAAGCTTAATGAAATTTATACTTTTGGTGGCGTGTCGGCAAGTATTGAGATGCTGAAGCCAATAATGCTGGTCCTTGTGACTATGGTTCTCCTTGTCCGTTTTACGCTTTCAAGAAGACCAAAGAATTTTAGGAAGTGGGATATATGGCAAGGCATTGACTTTTCACAATCCAAGCCTCAGGCTCGGGTCGATGGTTCAACTGGGGTAACTTTTGGCGATGTAGCTGGCATTGAAGAAGCAGTCGAAGAACTACAAGAGTTAGTTAATTACTTGAAGAATCCAGAGTTGTTTGACAAGATGGGGATAAAACCTCCACATGGAGTCCTCTTGGAAGGGCCACCTGGGTGTGGAAAGACTTTAGTTGCGAAGGCCATAGCTGGTGAAGCCGGGGTTCCATTTTACCAGATGGCAGGGTCGGAATTTGTTGAAGTGCTAGTTGGTGTTGGGTCTGCACGTATCAGAGATTTATTTAAGAGAGCCAAGGTAAATAAACCATCAGTCATATTTATCGATGAAATTGATGCATTGGCAACACGGCGTCAAGGGATATTCAGTGAATCGACTGACCATTTATACAATGCAGCAACTCAGGAGAGAGAAACTACTTTGAATCAGCTCTTAATTGAGCTTGATGGGTTTGATACTGGCAAAGGTGTGATATTTCTTGGTGCCACAAATCGAATGGACTTATTGGACCCTGCACTCCTTCGGCCAGGTCGTTTCGACAGAAAGATAAGGGTACGACCTCCCAATGCTAAGGGAAGATTGGACATTCTTAAAGTTCATGGCAGGAAGGTGAAATTATCACCTTCTGTTGATTTGTCTACTTATGCGAATGACTTACCTGGATGGACGGGTGCTAGGTTGGCTCAGCTTTTGCAAGAAGCTGCGTTGGTAGCTGCAAGGAAAGGGCATGAAGAGGTTGAGCAGTCAGACATTGACGACGCAGTGGATCGACTGACTGTTGGGCCTAAACGTGTGGGCATAGAACTGGGGAACCAAGGCCAATTCCGCAGGGCAACAACGGAGGTTGGAATTGCCATAACCTCCCATTTGCTAAGGAGACTTGAGAATGCGAAAGTTGAAAATTGTGACCGTGTGTCTATCACGCCGCGTGGCCAGACGTTATCCCAAGTTATATTTCATCGCCTTGATGATGAGTCATACATGTTTGAGAGGCGGCCACAGTTGCTTCATCGTCTTCAGGTATTGCTTGGTGGGAGGGCTGCTGAACAAGTCATATACGGGCGTGATACTTCAAGGGCTTCGGTTAACTATCTCGCTGATGCAACCTGGCTTGCCCGTAAAATAATAACCATATGGAATCTGGAGAACCCTATGGTCATACATGGAGAGCCACCACCCTGGACGAAGAAAGTTAAATTTGTGGGCCCAAGATTAGACTTCGAAGGATCATTGTATGATGACTATGACCTTATTGAACGTCCAATGAACTTCGATTTGGATGATCAAGTAGCTAAGAGAACCGAAGAGTTGCTCTGGGAAATGTATGACAGGACAATTACCCTGCTTAGACAGCATCATGCTGCCTTGCTCAAGACAATAAAGGTTCTATTAGAGCAAAAGGAGATCAGTGGGGCAGAAATTGACTATATCCTCGACAATTACCCTGCAGACACACCCATAAGTCTTCTACTCGAAGAGGAGAACCCGAGTAGTCTTCCTTTCTTCGGTGAGGGGCGGGGTAAAGAGCTAGAGCATGCCTTGTCGAGTAGTGAAATGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44430.p1 GENE.R_Transcript_44430~~R_Transcript_44430.p1 ORF type:complete len:946 (+),score=197.53,AAA|PF00004.25|3.1e-42,AAA|PF00004.25|2.5e+03,Peptidase_M41|PF01434.14|2.6e-18 R_Transcript_44430:188-3025(+)
MCTRETLLPARVYQPFPVTNISTITRSGIISIHIRKPSKKQLKTPKNSNLGALLFTRSRKPTILCQSNVDGATNSNSDDFVTRVLKENPTQVEPRFQVGDEVYTLTERERLNNKGSGFGAFELLKRLNLKADKEKGGQNLEGNVYLKDILREYKGKLYVPEQVFGANLSEEEEFNRNFEELPKMSYEEFVKFMRSDKVKLLTLKEQGEVISGSGFRDFIVELKESPGDKSLHRTKWAMRLGADEAQVLLDEYTGPQYEIETRMTSRVGKLPSYPNPVASSISSRIMVEFGMLSIVLAAAAAVVGGFIASAVFAVTSFVFVATVYIVWPVVRPFLKLLLGIVSGIAERVWDYLVDIFYDGGISAKLNEIYTFGGVSASIEMLKPIMLVLVTMVLLVRFTLSRRPKNFRKWDIWQGIDFSQSKPQARVDGSTGVTFGDVAGIEEAVEELQELVNYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFSESTDHLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRMDLLDPALLRPGRFDRKIRVRPPNAKGRLDILKVHGRKVKLSPSVDLSTYANDLPGWTGARLAQLLQEAALVAARKGHEEVEQSDIDDAVDRLTVGPKRVGIELGNQGQFRRATTEVGIAITSHLLRRLENAKVENCDRVSITPRGQTLSQVIFHRLDDESYMFERRPQLLHRLQVLLGGRAAEQVIYGRDTSRASVNYLADATWLARKIITIWNLENPMVIHGEPPPWTKKVKFVGPRLDFEGSLYDDYDLIERPMNFDLDDQVAKRTEELLWEMYDRTITLLRQHHAALLKTIKVLLEQKEISGAEIDYILDNYPADTPISLLLEEENPSSLPFFGEGRGKELEHALSSSEMA*

Click here to download the sequence:
Link to NCBI Protein BLAST