Transcript Information: R_Transcript_444351.p2


Annotated TAIR IDAT1G70310.1
Annotated Gene Namespermidine synthase 2
Annotated Gene Symbol(s)SPDS2
Annotation TypeHomolog
Chromosome Positionchr1:26485497-26487352 | Reverse length=340
E-Value1E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4983743605384
Replicate 20.93157646898251
Replicate 30.15635998359148
Condition 2: 8 Hour
Replicate 10.50141702963642
Replicate 20.076317002870941
Replicate 30.061950889489375
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.22410619133342


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_444351.p2 GENE.R_Transcript_444351~~R_Transcript_444351.p2 ORF type:complete len:293 (+),score=61.49,Spermine_synth|PF01564.13|3.8e-85 R_Transcript_444351:28-906(+)
ATGGATAAAATTAAAGATGGATGGTTCAATGAAACTGGAACTTTGTGGCCTGGACAAGCAATGAGCATTGAGGTTGATGAGGTTTTGTACTCTGGAAAATCTGACTACCAAGATCTCTTGTTCTTCAAATCCAAGACCTACGGAACCGTGTTCGTCCTTGATGGATCCATCCAAGTGACTGAGAGAGATCAACACGCATACTCTGAGATGATCGCTCACTTGCCAATCTTTGCACATCCTAACCCAAAGAAGGTGTTGGTCATCGGAGGAGGAGATGGTGCAGTGTTGTCTGAGGTCGTCAAGCACAAATCCGTCGAAGTTGCAGAGATCTGCGAGATCGACAAGGAGTGCATTGAGAAGTCCAAGATCTACTATCCTCAATGGAAGAACATCTGGACCCATCCTAAGGTCAAGGTCAACATTGCTGATGGATTCGTCTTCTTGAAGGAGCACGAGAATGAGTATGATGTCATCATCGTCGATTCCTCTGATCCTATCGGTCCTGCTCAATCCCTCTTTGAGATCCCATTTTATGAGTTGATGTACAAGGCATTGAGAGAGGGAGGTGTCATCTCCACCCAATCTGAATGCGTCTGGTTGCATCTCGACTTGATCTCCAAATTGTACAAACTCTCCAAGGAGATCTACAAGTCTGTTGATTATGCTTACACCACCATCCCTACCTATCCTTCTGGACAAATCGGATTCATGATCTGCTCCAAGGGAGAGAACCAAATCAACAAGCCTAAGAGAACTGTTGCAGAGGCTATCCATGCTGAGCAAGTTGACTCCATCCAATACTACAACGAGCAAATCCACACTGCATCCTTTGTCTTGCCAACCTTTGCTTTGAAGAAATTGGAAGGAAAGACCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_444351.p2 GENE.R_Transcript_444351~~R_Transcript_444351.p2 ORF type:complete len:293 (+),score=61.49,Spermine_synth|PF01564.13|3.8e-85 R_Transcript_444351:28-906(+)
MDKIKDGWFNETGTLWPGQAMSIEVDEVLYSGKSDYQDLLFFKSKTYGTVFVLDGSIQVTERDQHAYSEMIAHLPIFAHPNPKKVLVIGGGDGAVLSEVVKHKSVEVAEICEIDKECIEKSKIYYPQWKNIWTHPKVKVNIADGFVFLKEHENEYDVIIVDSSDPIGPAQSLFEIPFYELMYKALREGGVISTQSECVWLHLDLISKLYKLSKEIYKSVDYAYTTIPTYPSGQIGFMICSKGENQINKPKRTVAEAIHAEQVDSIQYYNEQIHTASFVLPTFALKKLEGKTN*

Click here to download the sequence:
Link to NCBI Protein BLAST