Transcript Information: R_Transcript_444395.p1


Annotated TAIR IDAT5G58420.1
Annotated Gene NameRibosomal protein S4 (RPS4A) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23619599-23620896 | Forward length=262
E-Value2E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32594573133426
Replicate 20.44992072320639
Replicate 30.57266843990381
Condition 2: 8 Hour
Replicate 10.087449517668733
Replicate 20.079860292289949
Replicate 30.064827180787096
Condition 3: 24 Hour
Replicate 10.16398433734074
Replicate 20.078768781752062
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_444395.p1 GENE.R_Transcript_444395~~R_Transcript_444395.p1 ORF type:5prime_partial len:280 (+),score=-26.31,Ribosomal_S4e|PF00900.16|5.8e-25,40S_S4_C|PF16121.1|2.2e+03,40S_S4_C|PF16121.1|1.3e-22,RS4NT|PF08071.8|8.8e-21,RS4NT|PF08071.8|6e+03,S4|PF01479.21|1.3e-07 R_Transcript_444395:2-841(+)
TCGAAGATGGCTCGCGGTCCGAAGAAGCACATGAAGCGTTTGAATGCGCCCAAGCACTGGATGCTTGACAAGCTCGGCGGCACCTGGGCACCGCGTCCGTCGACGGGTCCGCACAAGCTTCGCGAGTGCCTCCCGCTGTCGCTCATCCTCCGCAACCGCCTCCGCTACGCTCTCACGCGCCGTGAGGTGCTCCAGATCGTCATGCGCAAGTCGGTGCGCATTGATGGTCAGGTCCGAACGGATATCAACTACCCGGCCGGCTTCCAGGATGTCATCTCGCTCCCGAAGACGAGCGAGCAGTTCCGTCTCCTCTACGACGTCAAGGGCCGCTTCGTCCTCCACCGCATCACCCCGGAGGAGGCTGGCTACAAGCTCGTCCGTATCCAGAAGCTGGACAAGGCGAACAAGGCGTCGATCGGTCAGAATCCGTTCCAGACGGGTCAGCTCGCGGCGATCCCGTACGTCGTCACTCACGATGGCCGCACCGTCCGCTTCGCTGACCCGGCCTTCCGTGTCAACGACACCATCAAGCTTGATATTGCGACCGGCCGCCCGGTCGGCCACATCAAGTTCGATGTCGGCCAGCTCGCGATGATCACCCGTGGTCACAACATCGGTCGTGTCGGTACCGTTGTCTCGATCGAGAAGCACCCGGGTTCGTTCGATATCGCGCACATGAAGGATCGCCGTGGCAACACTTTCGCCACCCGTATCGGCAACGTGTTCATCATCGGTGATGGCTCGAAGCCGGCGATCTCGCTCCCGAAGGCGAAGGGTGTGAAGCTTTCAGTGATCGAAGAACGCGACCAGATGCTCGCTGCCGCGGCCAAGAAGAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_444395.p1 GENE.R_Transcript_444395~~R_Transcript_444395.p1 ORF type:5prime_partial len:280 (+),score=-26.31,Ribosomal_S4e|PF00900.16|5.8e-25,40S_S4_C|PF16121.1|2.2e+03,40S_S4_C|PF16121.1|1.3e-22,RS4NT|PF08071.8|8.8e-21,RS4NT|PF08071.8|6e+03,S4|PF01479.21|1.3e-07 R_Transcript_444395:2-841(+)
SKMARGPKKHMKRLNAPKHWMLDKLGGTWAPRPSTGPHKLRECLPLSLILRNRLRYALTRREVLQIVMRKSVRIDGQVRTDINYPAGFQDVISLPKTSEQFRLLYDVKGRFVLHRITPEEAGYKLVRIQKLDKANKASIGQNPFQTGQLAAIPYVVTHDGRTVRFADPAFRVNDTIKLDIATGRPVGHIKFDVGQLAMITRGHNIGRVGTVVSIEKHPGSFDIAHMKDRRGNTFATRIGNVFIIGDGSKPAISLPKAKGVKLSVIEERDQMLAAAAKKN*

Click here to download the sequence:
Link to NCBI Protein BLAST