Transcript Information: R_Transcript_444447.p2


Annotated TAIR IDAT2G42740.1
Annotated Gene Nameribosomal protein large subunit 16A
Annotated Gene Symbol(s)RPL16A
Annotation TypeOrtholog
Chromosome Positionchr2:17791794-17792946 | Forward length=182
E-Value2.7E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57339144360373
Replicate 20.5496413721544
Replicate 30.35979168999192
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.095034610577942
Condition 3: 24 Hour
Replicate 10.60098971800273
Replicate 20.11547255963653
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_444447.p2 GENE.R_Transcript_444447~~R_Transcript_444447.p2 ORF type:5prime_partial len:191 (+),score=-12.88,Ribosomal_L5_C|PF00673.17|7.5e+03,Ribosomal_L5_C|PF00673.17|6.3e-22,Ribosomal_L5|PF00281.15|3.1e-19,Ribosomal_L5|PF00281.15|9.5e+03 R_Transcript_444447:2-574(+)
TTCGTGTGTTGCCGCCCGTCCCTTATCAAGATGGCTGCCGCTGCTGATGCCGGTGAGGCGAAGACGAATGTCATGCGCAACATCAAGATTGCGAAGTTGGTCATCAACTGCTGCGTCGGTGAGTCGGGCGATCGTCTCACCCGCGCCGCCAAGGTGCTTCAGGAGCTGACCGACCAGGAGCCGGTCTTCAGCGCTGCGCGCCTCACTGTCCGCACCTTCTCGATTCGCCGCAATGAGAAGATTGCGACGCACGTCACCGTGAAGGGTGAGAAGGCCGAGGACATCCTCCAGAAGGGTCTCGCCGTGAAGGAGTTTGAGCTTCCGGATAAGTGCTTCTCGTCGGCTGGCAACTTCGGTTTCGGCATCCAGGAGCACATCGATCTCGGTCTCAAGTACGACCCGGCCGTCGGTATCTACGGTATGGACTTCTACATCGTCCTCACGCGCGCTGGCACCCGCGTTGCGCACCGCAAGCGCGGCCGTGCGCGCATCGGCAACAAGCAAAAGGTGACGAAGGAGGAGGCGAAGAAGTGGTTCGTCACCAAGTTCGGCGGACACATCCGCACCGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_444447.p2 GENE.R_Transcript_444447~~R_Transcript_444447.p2 ORF type:5prime_partial len:191 (+),score=-12.88,Ribosomal_L5_C|PF00673.17|7.5e+03,Ribosomal_L5_C|PF00673.17|6.3e-22,Ribosomal_L5|PF00281.15|3.1e-19,Ribosomal_L5|PF00281.15|9.5e+03 R_Transcript_444447:2-574(+)
FVCCRPSLIKMAAAADAGEAKTNVMRNIKIAKLVINCCVGESGDRLTRAAKVLQELTDQEPVFSAARLTVRTFSIRRNEKIATHVTVKGEKAEDILQKGLAVKEFELPDKCFSSAGNFGFGIQEHIDLGLKYDPAVGIYGMDFYIVLTRAGTRVAHRKRGRARIGNKQKVTKEEAKKWFVTKFGGHIRTD*

Click here to download the sequence:
Link to NCBI Protein BLAST