Transcript Information: R_Transcript_444448.p1


Annotated TAIR IDAT2G42740.1
Annotated Gene Nameribosomal protein large subunit 16A
Annotated Gene Symbol(s)RPL16A
Annotation TypeOrtholog
Chromosome Positionchr2:17791794-17792946 | Forward length=182
E-Value5.8E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47533752486247
Replicate 20.21871146266977
Replicate 30.95444739983968
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.1890792772957
Condition 3: 24 Hour
Replicate 10.11957191264429
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_444448.p1 GENE.R_Transcript_444448~~R_Transcript_444448.p1 ORF type:5prime_partial len:192 (+),score=25.53,Ribosomal_L5_C|PF00673.17|7.6e-25,Ribosomal_L5|PF00281.15|3.9e-17 R_Transcript_444448:3-578(+)
AAAATGTCGAAGGAAGTGAAGGACAAGCCATCTGAAGAAGCTGGTGAAGCTGGCAAGGAAAAATCACTTGTCATGCGCAACATCAAGATCGCCAAGTTAGTGGTCAACTGTTGTGTCGGTGAATCTGGTGATCGTTTGACTCGTGCATCACGCGTGTTAAAGGAATTAACTGAACAAGAACCAGTGTTCTCTGAAGCTCGCTTAACTGTGCGTACCTTCGGCATTCGTCGTAACGAAAAGATTGCCTGTCACGTCACTGTTCGTGGCAAGAAGGCTGAAGAAATCTTAGACAAAGGTTTACAAGTAAAGGAATTCGAATTAAAGGATTCAAACTTCTCCAGCCAAGGTCACTTCGGTTTCGGTATTGATGAACACATTGATCTTGGTATCAAGTACGACCCTGCCATTGGTATTTATGGTATGGATTTCTATGTCGTATTAGCTCGTCCAGGTTTCCGTGTCGCCAAGAAGAAGCGTTCATATGGCAAGATCGGTAACAAGCACTTAATCAACAAAGAAGCCGCTCAAGCATGGTTCAAGCAACGCTTTGGTGGTACAGTTCGCGTTGGCGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_444448.p1 GENE.R_Transcript_444448~~R_Transcript_444448.p1 ORF type:5prime_partial len:192 (+),score=25.53,Ribosomal_L5_C|PF00673.17|7.6e-25,Ribosomal_L5|PF00281.15|3.9e-17 R_Transcript_444448:3-578(+)
KMSKEVKDKPSEEAGEAGKEKSLVMRNIKIAKLVVNCCVGESGDRLTRASRVLKELTEQEPVFSEARLTVRTFGIRRNEKIACHVTVRGKKAEEILDKGLQVKEFELKDSNFSSQGHFGFGIDEHIDLGIKYDPAIGIYGMDFYVVLARPGFRVAKKKRSYGKIGNKHLINKEAAQAWFKQRFGGTVRVGE*

Click here to download the sequence:
Link to NCBI Protein BLAST