Transcript Information: R_Transcript_444462.p1


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeHomolog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28972953896379
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.70986926479954
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_444462.p1 GENE.R_Transcript_444462~~R_Transcript_444462.p1 ORF type:5prime_partial len:189 (+),score=42.02,HMG_box|PF00505.15|1.7e-14,HMG_box|PF00505.15|1.8e-23,HMG_box_2|PF09011.6|6.9e-21,HMG_box_2|PF09011.6|8.3e-14 R_Transcript_444462:2-568(+)
TCGGCCTATGCTTTCTTCGTGCAGACCTGCCGCGAAGAGCATAAGAAGAAACACCCCAGCGAAAGTGTTGTCTTTGCTGAGTTCTCGAAGAAGTGCTCTGAGCGCTGGAAGACCATGAGCGACAAGGAGAAGCACCGCTTCCACCAGCTGGCTGAGAAGGACAAGAAGCGCTACGATGGTGAGATGGCCAACTACAAGCCCAAGAAGGGTGAGGGCCGCAAGAAGAAGCGCCAAAAGGACCCCGACGCACCTAAGCGCCCGCTCTCGGCTTTCTTCTGGTTCTGCAATGACGAGCGTCCCAAGGTGAAGGCCACCATGCCCGACTCGACTGTCGGTGATGTCGCCAAGGAGCTCGGCCGCCGCTGGAATGAGTGTACCGAGGACCAAAAGTCCAAGTACGAGGCTCTGGCTGCCAAGGACAAGGCTCGCTACGAGAAGGAGCTGAAGGCGTACAAGTCTGGCAAGCCGGTTCCTACCAAGGGCAAGGCCGCCGCAAAGCCGGTGAAGAAGGTCGAATCGTCCGAGGAGGAGGAGGATGAATCCGAGGAGGAAGAGGATTCCGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_444462.p1 GENE.R_Transcript_444462~~R_Transcript_444462.p1 ORF type:5prime_partial len:189 (+),score=42.02,HMG_box|PF00505.15|1.7e-14,HMG_box|PF00505.15|1.8e-23,HMG_box_2|PF09011.6|6.9e-21,HMG_box_2|PF09011.6|8.3e-14 R_Transcript_444462:2-568(+)
SAYAFFVQTCREEHKKKHPSESVVFAEFSKKCSERWKTMSDKEKHRFHQLAEKDKKRYDGEMANYKPKKGEGRKKKRQKDPDAPKRPLSAFFWFCNDERPKVKATMPDSTVGDVAKELGRRWNECTEDQKSKYEALAAKDKARYEKELKAYKSGKPVPTKGKAAAKPVKKVESSEEEEDESEEEEDSD*

Click here to download the sequence:
Link to NCBI Protein BLAST