Transcript Information: R_Transcript_444554.p1


Annotated TAIR IDAT4G28200.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:13987808-13990422 | Reverse length=648
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.79860292289948
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_444554.p1 GENE.R_Transcript_444554~~R_Transcript_444554.p1 ORF type:internal len:84 (+),score=2.91 R_Transcript_444554:3-251(+)
GATATGTTGCAGGCTCGAAGCTATATGCAACGTGGACTACGATTCTGCAAGAGTGCTAAGACGTTATGGATTCAATATGCGAAATTGGAATTGATCTATATTGCCAAGCTGGTAGCACGTCAACGGATATTGGGACTCGACGAGGCTAGCCAACAGCCTAAACCTATTGAAGATAAAGAACTCGACACCGACGCCGATATGATTGCTATGCCGACGATCACTGGCGAGGACCTTGACCCCAGTGGGGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_444554.p1 GENE.R_Transcript_444554~~R_Transcript_444554.p1 ORF type:internal len:84 (+),score=2.91 R_Transcript_444554:3-251(+)
DMLQARSYMQRGLRFCKSAKTLWIQYAKLELIYIAKLVARQRILGLDEASQQPKPIEDKELDTDADMIAMPTITGEDLDPSGG

Click here to download the sequence:
Link to NCBI Protein BLAST