Transcript Information: R_Transcript_444704.p1


Annotated TAIR IDAT5G04870.1
Annotated Gene Namecalcium dependent protein kinase 1
Annotated Gene Symbol(s)CPK1, ATCPK1
Annotation TypeHomolog
Chromosome Positionchr5:1417015-1419877 | Reverse length=610
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41017889785885
Replicate 20.58978371955893
Replicate 30.12868953705704
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_444704.p1 GENE.R_Transcript_444704~~R_Transcript_444704.p1 ORF type:complete len:178 (+),score=29.98,EF-hand_1|PF00036.28|9.2e-07,EF-hand_1|PF00036.28|0.00052,EF-hand_1|PF00036.28|5.6e-05,EF-hand_1|PF00036.28|0.039,EF-hand_7|PF13499.2|7.2e-13,EF-hand_7|PF13499.2|0.00039,EF-hand_7|PF13499.2|4.3e-08,EF-hand_6|PF13405.2|1.9e-05,EF-hand_6|PF13405.2|0.11,EF-hand_6|PF13405.2|3e-05,EF-hand_6|PF13405.2|1.9,EF-hand_5|PF13202.2|6.8e-05,EF-hand_5|PF13202.2|0.007,EF-hand_5|PF13202.2|1.3e+03,EF-hand_5|PF13202.2|5.6e-05,EF-hand_5|PF13202.2|15,EF-hand_8|PF13833.2|0.37,EF-hand_8|PF13833.2|0.00066,EF-hand_8|PF13833.2|0.1,EF-hand_8|PF13833.2|0.32 R_Transcript_444704:24-536(+)
ATGAATAGAGCACCACCTCCTCTCAGCAGACGTATTTTTGACAAGTATGATAAAGATAAAAGTGGATCCATCTCAATTGATGAATTTTCTGCATTGTGCTATGAGCTCGGACATCATTTGAGTGAAGAAGAGAAAGTCTTGGCAATCCAAAAATTGGACTCTGACGGATCTGGATCAATCAGCTACAATGAATTTGAACCTTGGTGGAAGAATTCTGACAGATTCTCCAAGCTCCAATTGTCTCAAGATGAGTTGGAGACTCTTCGTACCGCAACCCGCTACTTCCAATATTTCGACAAAGATCACAGTGGTTCCATCGATCGTTCGGAATTTACTTCTTTGTATCAAGACATGGCAAAGCATGGAATCATCAAAATTCCACTTGAAGAGTGCTTGAATGATCTTGATGAAGATCACAACAATTCTGTTTCCTTCAACGAGTACGTTGACTTCCTCGTGAGAAAAAATTGTCTCAAGGTCAAGGTGATCTATGAAAATACCAAAAAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_444704.p1 GENE.R_Transcript_444704~~R_Transcript_444704.p1 ORF type:complete len:178 (+),score=29.98,EF-hand_1|PF00036.28|9.2e-07,EF-hand_1|PF00036.28|0.00052,EF-hand_1|PF00036.28|5.6e-05,EF-hand_1|PF00036.28|0.039,EF-hand_7|PF13499.2|7.2e-13,EF-hand_7|PF13499.2|0.00039,EF-hand_7|PF13499.2|4.3e-08,EF-hand_6|PF13405.2|1.9e-05,EF-hand_6|PF13405.2|0.11,EF-hand_6|PF13405.2|3e-05,EF-hand_6|PF13405.2|1.9,EF-hand_5|PF13202.2|6.8e-05,EF-hand_5|PF13202.2|0.007,EF-hand_5|PF13202.2|1.3e+03,EF-hand_5|PF13202.2|5.6e-05,EF-hand_5|PF13202.2|15,EF-hand_8|PF13833.2|0.37,EF-hand_8|PF13833.2|0.00066,EF-hand_8|PF13833.2|0.1,EF-hand_8|PF13833.2|0.32 R_Transcript_444704:24-536(+)
MNRAPPPLSRRIFDKYDKDKSGSISIDEFSALCYELGHHLSEEEKVLAIQKLDSDGSGSISYNEFEPWWKNSDRFSKLQLSQDELETLRTATRYFQYFDKDHSGSIDRSEFTSLYQDMAKHGIIKIPLEECLNDLDEDHNNSVSFNEYVDFLVRKNCLKVKVIYENTKKN*

Click here to download the sequence:
Link to NCBI Protein BLAST