Transcript Information: R_Transcript_44475.p1


Annotated TAIR IDAT1G73760.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27739366-27741161 | Reverse length=367
E-Value1.2E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.904749121696
Replicate 237.938142821173
Replicate 339.178420164454
Condition 2: 8 Hour
Replicate 130.142944090229
Replicate 231.844980001413
Replicate 334.926202504055
Condition 3: 24 Hour
Replicate 141.719877272414
Replicate 235.9728877767
Replicate 340.529991092634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44475.p1 GENE.R_Transcript_44475~~R_Transcript_44475.p1 ORF type:5prime_partial len:290 (+),score=74.54,zf-RING_2|PF13639.2|5e-13,zf-rbx1|PF12678.3|3.1e-10,zf-C3HC4|PF00097.21|2.7e-07,zf-RING_11|PF17123.1|8.9e+03,zf-RING_11|PF17123.1|1.4e-07,zf-RING_5|PF14634.2|1.3e-06,zf-C3HC4_2|PF13923.2|2.4e-06,zf-C3HC4_3|PF13920.2|1.4e-05 R_Transcript_44475:1-870(+)
GCTCAGCCTGAAGTTACTGTTCCTGGGGTTGTAAGGTCTTCTGCTCACTGGGAAGACAGCAAAGATAACAAAAACAAGAACAACAACAAGAAGAAGAAAAAGAAGAATAAACATCACCAACATTTGCTGCAGGATTACTCCAATTCAAATGGGGGGTTGGATTTGTGGTGTGGGCCTGGAATTGGTGCCTTTGGTTCTTCTAATTCTGCTGCTGATTGTGTTGTTGTGTCTGCTAGACAACCTCTTTCTGGTGGTACTAGAGGCAAAATTGATCTTATTCATAAACCTTCTCATCAACCCCATACTCATAGTCACAGAGAGCGTGCCTCTTATTCTTCTCGGCAAAGATTCAACCCTGAGCACTTTGCTTCCACGGACCTAGATTCTGCATTTGAAATTCCCCGTATTGGGTTGGATGTATTTGAAGAACAGTACTACAATCATTTGCGGAATCGATCGCCTGAAGAGCTAGCAGAGATTGTGATGTTTCAAAATGGTTTGCTGATGGGAAGAAGATCAAATGGTCTTGATAGATACCGAGATTGGAGACTAGATGTTGATAATATGACATATGAGGAATTACTTGAGCTCGGTGAAAGGATTGGATATGTAAGCACTGGATTGGGAGAAGATCAGATTGGCCAATGCATCAGGAAAACTAAACTCTGTGTCCTGGATGAACTGTCCTCTGAGCCACATGTGCCAGCGGATGTAGAAGGAAAGTGCAGCATTTGTCAGGAAGAGTATGAAGAAGACGACGAAATGGGGAAACTGGAATGTGGTCATGCTTATCACTTGCATTGCATAAAGCAGTGGCTTGTCCAGAAGAATGCTTGCCCTGTCTGTAAAGCTGAAGCATCGACTCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44475.p1 GENE.R_Transcript_44475~~R_Transcript_44475.p1 ORF type:5prime_partial len:290 (+),score=74.54,zf-RING_2|PF13639.2|5e-13,zf-rbx1|PF12678.3|3.1e-10,zf-C3HC4|PF00097.21|2.7e-07,zf-RING_11|PF17123.1|8.9e+03,zf-RING_11|PF17123.1|1.4e-07,zf-RING_5|PF14634.2|1.3e-06,zf-C3HC4_2|PF13923.2|2.4e-06,zf-C3HC4_3|PF13920.2|1.4e-05 R_Transcript_44475:1-870(+)
AQPEVTVPGVVRSSAHWEDSKDNKNKNNNKKKKKKNKHHQHLLQDYSNSNGGLDLWCGPGIGAFGSSNSAADCVVVSARQPLSGGTRGKIDLIHKPSHQPHTHSHRERASYSSRQRFNPEHFASTDLDSAFEIPRIGLDVFEEQYYNHLRNRSPEELAEIVMFQNGLLMGRRSNGLDRYRDWRLDVDNMTYEELLELGERIGYVSTGLGEDQIGQCIRKTKLCVLDELSSEPHVPADVEGKCSICQEEYEEDDEMGKLECGHAYHLHCIKQWLVQKNACPVCKAEASTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST