Transcript Information: R_Transcript_44539.p1


Annotated TAIR IDAT1G71200.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:26835973-26837308 | Reverse length=234
E-Value7E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.764226709378
Replicate 21.3269037437809
Replicate 33.3210511756504
Condition 2: 8 Hour
Replicate 12.3666635264995
Replicate 23.075660327598
Replicate 33.7787739581475
Condition 3: 24 Hour
Replicate 13.3284553229757
Replicate 24.0994905001073
Replicate 34.3124473918422


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44539.p1 GENE.R_Transcript_44539~~R_Transcript_44539.p1 ORF type:5prime_partial len:269 (+),score=44.82,HLH|PF00010.22|1.4e-08,HLH|PF00010.22|2.9e+03 R_Transcript_44539:2-808(+)
CCAATATTCAGCTGGGCAATGAAAATTTTGGCTAGACCAAAATGCTCCAAAACAAGCTTTACATCAATTTATATGGTCTCTTCCTTGACTGGGCAATTTCCCACAACACAAGAGACCAACGATTGGGTGGCCTTAGCAGAACAAGTGGGCCTTGATCTTGTGCAACAAGGTGCAGAGGGATCATCTGATGGGCTAGAGTTACAACACCGTTCGATCGATGATGATCATGATCAAATTGACGTTGGTCGTATAGCTGATTTTGAAGATTGGTCATCTTTTAAGAAACTTGCTCATAATGCTAAGGAAAGAGTGAGGAGGCTCAAAGTTAATGAATCTTACTTAGCACTACGATCTTTGCTGCCTCATTCTAAAAGGGCTAAGGAGAAGTGGAGTGCACCGTATATAATAGATAGCACACTTGAATACATCCCTCAACTTGAAGCCGAGATAGAGAAGTTAAGAGTAGAGAAGCAGAACATCTTATCAGTGATTAAAGAGAAGGAAGTGCTTATCAGCGATGATAAGCAGAATGATAAGCAGAGCATTTCAGTGTCGATAAATGAAGTCAAGAGGGGTGAAGTTATTATCCAGATTTGCCTACAGAGGGACAAGCTTAATAACTTCTCCAATTTGTTAGAAATTCTTGAAGTCAAAGGCGTGCAGGTCATAGGTGCCTCTTCTGTATGGGCCTGTCAAGATAGATCCTGCTTCCATCTTCATGTTCAGATAATTGAAGTTTCAGATATTCCACTTGAAGATAATTATGTCGACGACTTACAAAAGAAATTGAATTCCTGGTTGTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44539.p1 GENE.R_Transcript_44539~~R_Transcript_44539.p1 ORF type:5prime_partial len:269 (+),score=44.82,HLH|PF00010.22|1.4e-08,HLH|PF00010.22|2.9e+03 R_Transcript_44539:2-808(+)
PIFSWAMKILARPKCSKTSFTSIYMVSSLTGQFPTTQETNDWVALAEQVGLDLVQQGAEGSSDGLELQHRSIDDDHDQIDVGRIADFEDWSSFKKLAHNAKERVRRLKVNESYLALRSLLPHSKRAKEKWSAPYIIDSTLEYIPQLEAEIEKLRVEKQNILSVIKEKEVLISDDKQNDKQSISVSINEVKRGEVIIQICLQRDKLNNFSNLLEILEVKGVQVIGASSVWACQDRSCFHLHVQIIEVSDIPLEDNYVDDLQKKLNSWLS*

Click here to download the sequence:
Link to NCBI Protein BLAST