Transcript Information: R_Transcript_44542.p1


Annotated TAIR IDAT1G71200.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:26835973-26837308 | Reverse length=234
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4124315024485
Replicate 21.8121806906924
Replicate 32.590642942422
Condition 2: 8 Hour
Replicate 13.6437299028639
Replicate 23.7268136401976
Replicate 33.9976761485376
Condition 3: 24 Hour
Replicate 13.8946280118427
Replicate 23.872798436143
Replicate 34.6902224329066


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44542.p1 GENE.R_Transcript_44542~~R_Transcript_44542.p1 ORF type:complete len:336 (+),score=43.35,HLH|PF00010.22|3.3e-07,HLH|PF00010.22|3.8e+03 R_Transcript_44542:79-1086(+)
ATGTACTTGCATGCTAAGGCACTTGTACTAGCAACATTAGCAATTAGAATAATATTAAGCTCCAAAGAAGTAGTACTTCCCCAGTTTACTATAACCCAATCATGTCTATTATTCTTCTCCCAATGTCCACAAAACAATAGTCCCACATATAATCTTTCAATCTCCTCTTCTCTATCCAAGGGGCAACATTATTACTCACCACCAATATTCAGCTGGACAATGAAGATTTTGACGAGACCAAAATGCTCCAAAACAAGCTTTACATCAATTTATATGATCTCTTCTTTGACTGGGCAATTTCCCACAACACAAGAGACCAACGATTGGGTGGCCTTAGCAGAACAAGTGGGCCTTGATCTTGTGCAACAAGGTGCAGAGGGATCATCTGATGGACTAGAGTTTCAACACCGTTCGATCGATCATGATCATGATCAAGTTCAAGTTGGTGGTATAGCTGATTTTGAAGATTGGTCATCTTTCAAGAAACTTGTTCATAATGCTAAGGAAAGAGTAAGGAGGCTCAAGGTTAATGAAACTTACTTGGCACTACGATCTTTGCTGCCTGATTCCAAAAGAGCTAAGGAGAAACGGAGTGCATCGTATATAATAGATAGAACACTCGAATACATCCCTCAACTTGAAGCCGAGATAGAGAAGTTAAGAGTAGAGAAGCAGAACATCTTATCAGTGATTAAAGAGAAGGAAGTGCTTATCAGCGATGATAAGCAGAATGATAAGCAGAGCATTTCAGTGTCGATAAATGAAGTCAAGAGGGGTGAAGTTATTATCCAGATTTGCCTACAGAGGGACAAGCTTAATAACTTCTCCAATTTGTTAGAAATTCTTGAAGTCAAAGGCGTGCAGGTCATAGGTGCCTCTTCTGTATGGGCTTGTCAACATAGATCCTGCTTCCATCTTCATCTTCAGATAACTGAAGTTCCAGAAATTCCACTTGAAGCTAATTATGTCGATGACTTACAAAAGAAATTGATTTCTTGGTTATCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44542.p1 GENE.R_Transcript_44542~~R_Transcript_44542.p1 ORF type:complete len:336 (+),score=43.35,HLH|PF00010.22|3.3e-07,HLH|PF00010.22|3.8e+03 R_Transcript_44542:79-1086(+)
MYLHAKALVLATLAIRIILSSKEVVLPQFTITQSCLLFFSQCPQNNSPTYNLSISSSLSKGQHYYSPPIFSWTMKILTRPKCSKTSFTSIYMISSLTGQFPTTQETNDWVALAEQVGLDLVQQGAEGSSDGLEFQHRSIDHDHDQVQVGGIADFEDWSSFKKLVHNAKERVRRLKVNETYLALRSLLPDSKRAKEKRSASYIIDRTLEYIPQLEAEIEKLRVEKQNILSVIKEKEVLISDDKQNDKQSISVSINEVKRGEVIIQICLQRDKLNNFSNLLEILEVKGVQVIGASSVWACQHRSCFHLHLQITEVPEIPLEANYVDDLQKKLISWLS*

Click here to download the sequence:
Link to NCBI Protein BLAST