Transcript Information: R_Transcript_445504.p1


Annotated TAIR IDAT2G16940.2
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7342869-7347052 | Reverse length=610
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5888051920877
Replicate 20.90306668457196
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_445504.p1 GENE.R_Transcript_445504~~R_Transcript_445504.p1 ORF type:5prime_partial len:93 (+),score=7.36,RRM_1|PF00076.18|1.2e-10,RRM_6|PF14259.2|2e-08 R_Transcript_445504:2-280(+)
CGATCTCAACTTTCAACCAATGCAATCTACGTCGGTCAATTTCCCGAAAACGTCGTTGAAGATGACGTGAAGAAACTTTTTCCAAAAGCCAACAAAATCGAACTATTTCCAGCTAAAGCTACAAACAAAGGCGTCCGACCCGGTTTCGCATTTGTCACATTTCCTGATGATAATTCTGCAGCCGCTGCAGTTAAACTTGGCCCATCATTAACACTCAAAGATACACAATTGAAAGTTGCTTACCAAACCAAACGCGCAACACCTGCAGCAGCCGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_445504.p1 GENE.R_Transcript_445504~~R_Transcript_445504.p1 ORF type:5prime_partial len:93 (+),score=7.36,RRM_1|PF00076.18|1.2e-10,RRM_6|PF14259.2|2e-08 R_Transcript_445504:2-280(+)
RSQLSTNAIYVGQFPENVVEDDVKKLFPKANKIELFPAKATNKGVRPGFAFVTFPDDNSAAAAVKLGPSLTLKDTQLKVAYQTKRATPAAAE*

Click here to download the sequence:
Link to NCBI Protein BLAST