Transcript Information: R_Transcript_44572.p1


Annotated TAIR IDAT2G36240.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15195663-15197156 | Forward length=497
E-Value2.3E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8169221524766
Replicate 23.7707641563964
Replicate 34.908586627747
Condition 2: 8 Hour
Replicate 14.897172989449
Replicate 27.2102435324639
Replicate 36.2234093555612
Condition 3: 24 Hour
Replicate 16.8873421683112
Replicate 24.0509659186775
Replicate 37.7723686031023


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44572.p1 GENE.R_Transcript_44572~~R_Transcript_44572.p1 ORF type:complete len:490 (+),score=86.14,PPR_2|PF13041.2|35,PPR_2|PF13041.2|1.5e-14,PPR_2|PF13041.2|2.2e-16,PPR_2|PF13041.2|1.1e-12,PPR_2|PF13041.2|0.00068,PPR_2|PF13041.2|41,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|2.6e-08,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|3.6e-05,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|1.4e-07,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|0.098,PPR_1|PF12854.3|23,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.1e-08,PPR_1|PF12854.3|8.3e+02,PPR|PF01535.16|0.59,PPR|PF01535.16|4.1e-05,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|0.006,PPR|PF01535.16|26,PPR|PF01535.16|0.29,PPR|PF01535.16|27,PPR|PF01535.16|0.00033,PPR|PF01535.16|2e+03,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|3.4e-06,PPR_3|PF13812.2|3,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|3.9e+03 R_Transcript_44572:1358-2827(+)
ATGAAAGGAACAACTACCAGATTGGCGATGAGAAAACTCCCAGCACCTCATGTGAAGCATCTTCAACCAGCAACAACTGGGGTGACTCCTACCCCAACTTCGTTACCTGAAGCCTTGCCAGCTCCACTGCCTACACTCTCTCTGGCCTCGTCAGCCACACAAACCCAGCTCCTAACATTCCTTAAAGCCCACCTTAAACCTCCAATCACCCCACAAAACCTTCTCCACTTTCTCAAGAACAAGCTCCATTACCATCCTAAGTTTACCCACCTTGACTTTCACATCTTCCAGTGGGCCACCAACATTGACTCTTACCGCCATGATCATCACATCTATGAATGGATGGTCAGAACCCTTGCCATTTCAGACCGCTTTGATACTCTTTGTATAGTGGTCCTGGAAAGTATGCCTTCTAATCCATGCCCCTGCTCTGATGGCATCTTTTGCTGTCCAAGGATTGAACCCATCTATAGATTTGCCATCAATTCTTTTTGCAGAGCAGGGAGACTGGGTGATTCTTTGACTGCTTTTGATACTATGCGGAAATTGATTGATGGGAGACCCAATGTCGCTCTTTATAATATTTTGATTCATGGATTTGAGAAGAATGGCCAACATGACAGGGCATTGAGCTTGTATGATAGGCTTATTGTGGACAGAGTTAAGCCAGATGTGTTTACATTCAATATATTGATCAGTAGCTACTGTAGGAATTCAAGTTTTTGTTTGGCTTTGGAAATTTTCAAGGAGATGAGGGCTAAGGGGTGCGAGCCTAATGTGGTTAGTTTCAATACTTTGATTAAAGGTTTCTTTAGGGAGAAGAAGTTTGAGGAAGGGATCTCCATGGCTTATGAGATGATAGAGCTAGGCTGTCAAATCACATGCGTGACATGTGAGATTTTGATCAATGGGCTTTGTAAAGTTGGGAGAATGTTGAGAGCTTGTGGGCTGTTGATCGATCTTGCAAGGAAAGGGTTTTTGCCAGATGGGTTTGATTGTTCTGACATTGTGGAGAGGCTTTGCAGTGGTTCAAATGTAAATGGAGCATTAGAGGTTGTAGAGGAGATGTGGAAGGCAGGGAAAGCTCCAGGCTTAATTGCTTGTATCACTTTGGTAGAATGCTTGAGGAAAGCTGGAAATGTAATAGAGGCTCTGAGATTGGTGGACAAGTTGTTAACAGAGGGTATTCTATTGGATAGTGTGACCTTTAATTGTCTTCTTCAAGATGCTAGTCGTATGGGAAAAACTACCGAGGCTGATAGACTGAGGTTATTGGCTTCCAGCAAGGGTTTGCATCCTGATGTGATGACCTATAATATATTGGTTGAGGGCTACACGCGGGAAGGTAAAAGAAAGGAGGGTGAGCGCTTGGTTGAGGAGATGCTCGATAAAGAATATATTCATGATATTGCCTCCTACAACAGATTGATGGACGGGCTTCGAACTTGTTCTGTTTCTGGACAAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44572.p1 GENE.R_Transcript_44572~~R_Transcript_44572.p1 ORF type:complete len:490 (+),score=86.14,PPR_2|PF13041.2|35,PPR_2|PF13041.2|1.5e-14,PPR_2|PF13041.2|2.2e-16,PPR_2|PF13041.2|1.1e-12,PPR_2|PF13041.2|0.00068,PPR_2|PF13041.2|41,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|2.6e-08,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|3.6e-05,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|1.4e-07,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|0.098,PPR_1|PF12854.3|23,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.1e-08,PPR_1|PF12854.3|8.3e+02,PPR|PF01535.16|0.59,PPR|PF01535.16|4.1e-05,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|0.006,PPR|PF01535.16|26,PPR|PF01535.16|0.29,PPR|PF01535.16|27,PPR|PF01535.16|0.00033,PPR|PF01535.16|2e+03,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|3.4e-06,PPR_3|PF13812.2|3,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|3.9e+03 R_Transcript_44572:1358-2827(+)
MKGTTTRLAMRKLPAPHVKHLQPATTGVTPTPTSLPEALPAPLPTLSLASSATQTQLLTFLKAHLKPPITPQNLLHFLKNKLHYHPKFTHLDFHIFQWATNIDSYRHDHHIYEWMVRTLAISDRFDTLCIVVLESMPSNPCPCSDGIFCCPRIEPIYRFAINSFCRAGRLGDSLTAFDTMRKLIDGRPNVALYNILIHGFEKNGQHDRALSLYDRLIVDRVKPDVFTFNILISSYCRNSSFCLALEIFKEMRAKGCEPNVVSFNTLIKGFFREKKFEEGISMAYEMIELGCQITCVTCEILINGLCKVGRMLRACGLLIDLARKGFLPDGFDCSDIVERLCSGSNVNGALEVVEEMWKAGKAPGLIACITLVECLRKAGNVIEALRLVDKLLTEGILLDSVTFNCLLQDASRMGKTTEADRLRLLASSKGLHPDVMTYNILVEGYTREGKRKEGERLVEEMLDKEYIHDIASYNRLMDGLRTCSVSGQS*

Click here to download the sequence:
Link to NCBI Protein BLAST