Transcript Information: R_Transcript_44622.p1


Annotated TAIR IDAT5G17990.1
Annotated Gene Nametryptophan biosynthesis 1
Annotated Gene Symbol(s)TRP1, pat1
Annotation TypeOrtholog
Chromosome Positionchr5:5957330-5959681 | Forward length=444
E-Value2.5E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8215368559634
Replicate 23.0560652897038
Replicate 34.4455124175821
Condition 2: 8 Hour
Replicate 12.3099872591741
Replicate 23.7368589599825
Replicate 36.7518120366938
Condition 3: 24 Hour
Replicate 16.2499690835529
Replicate 23.9830251904816
Replicate 36.1946334019521


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44622.p1 GENE.R_Transcript_44622~~R_Transcript_44622.p1 ORF type:5prime_partial len:371 (+),score=90.39,Glycos_transf_3|PF00591.17|4.9e-73,Glycos_trans_3N|PF02885.13|1.1e-10 R_Transcript_44622:1-1113(+)
CTCTCAGGAGCCGTACAAACAGAATTCTGCATACTGCCCATCACAACTCTTGTCTTGCTTGGGTCTCATTTTTTTCCTCTTCTTTTTCTTTTTCATTTCATTTTTTCCCTCCTTAATTCAATCTCCGAAACAAGTTCATCAATCTTTTCTCAGAACAACAAACAAACAACAATGGCTCTTCTAGGTTGTCAACATTTCCCAATTCATTCTTCTCTTTCTTCTTCTTCTCCTCCAAATTCACAGTTCAAAACACCACACTTTGCTTTGCAAAACAGATTTCTTCCTCCCAAATTTGGTCAAACGGTGCCGTTTTTGGGTCGTTCTGGTTTTGCAATCTCAAGTGCTAAATCTGGCTCTTCTATCTCCTCCTTTAGCCAGTTGATTGAGAGTTTGATTGAAAAAACTGATTTATCTGAGTTGGATGCTGAAGCTTCTTTGGATTTCCTGCTGAATGAACCAAATGAAGCCTTGATCAGTGCTTTTCTTGTCTTGCTGAGAGCCAAAGGAGAAACCTATGAAGAAATTGTTGGACTGGCTAAGGCAATGATGAAACATTGTAAGAGAGTGGAGGGATTGGATGATGTAGTTGACATTGTCGGCACTGGTGGTGATGGAGCAAACACGGTGAACATTTCGACTGGTGCTTCGATACTGGCTGCGGCTTGTGGTGCCAAAGTAGCTAAGCAAGGGAATAGATCGAGCTCTTCAGCTTGTGGGAGTGCCGATGTTTTGGAAGAATTGGGAGTTGCCCTTGAGTTAGAACCAGAGGGGATAAGAAGCTGTGTTAGTGAGGCTGGGATTGGTTTCATGATGGCTCCAATTTACCATCCTGCTATGAAGGTTGTCAGACCAGCAAGGAAAATCCTGAAAGTAAAAACAGTGTTCAACATTTTAGGCCCCATGTTGAATCCAGCTCGCATACCTTTTGCGGTGGTTGGGGTTTATACAGAAGATATTGTGCCTAAAATGGCTAAGGCACTTCAAAGGTTTGGCATGAAAAGAGCATTGGTGGTGCACTCAGAGGGATTGGATGAAATGAGCCCTTTGGGACCAGGATTTGTTCTTGATGTCACTCCAGAAAGAATAGAGAAGTTCACATTTGATCCCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44622.p1 GENE.R_Transcript_44622~~R_Transcript_44622.p1 ORF type:5prime_partial len:371 (+),score=90.39,Glycos_transf_3|PF00591.17|4.9e-73,Glycos_trans_3N|PF02885.13|1.1e-10 R_Transcript_44622:1-1113(+)
LSGAVQTEFCILPITTLVLLGSHFFPLLFLFHFIFSLLNSISETSSSIFSQNNKQTTMALLGCQHFPIHSSLSSSSPPNSQFKTPHFALQNRFLPPKFGQTVPFLGRSGFAISSAKSGSSISSFSQLIESLIEKTDLSELDAEASLDFLLNEPNEALISAFLVLLRAKGETYEEIVGLAKAMMKHCKRVEGLDDVVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGNRSSSSACGSADVLEELGVALELEPEGIRSCVSEAGIGFMMAPIYHPAMKVVRPARKILKVKTVFNILGPMLNPARIPFAVVGVYTEDIVPKMAKALQRFGMKRALVVHSEGLDEMSPLGPGFVLDVTPERIEKFTFDPS*

Click here to download the sequence:
Link to NCBI Protein BLAST