Transcript Information: R_Transcript_44624.p1


Annotated TAIR IDAT5G17990.1
Annotated Gene Nametryptophan biosynthesis 1
Annotated Gene Symbol(s)TRP1, pat1
Annotation TypeOrtholog
Chromosome Positionchr5:5957330-5959681 | Forward length=444
E-Value2.1E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9576557102554
Replicate 22.1385120794378
Replicate 31.5907456663995
Condition 2: 8 Hour
Replicate 11.4736863162694
Replicate 23.5197684379644
Replicate 33.1093036710848
Condition 3: 24 Hour
Replicate 12.3382951805995
Replicate 22.4505843211753
Replicate 31.4186475260026


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44624.p1 GENE.R_Transcript_44624~~R_Transcript_44624.p1 ORF type:3prime_partial len:216 (+),score=53.75,Glycos_transf_3|PF00591.17|4e-67 R_Transcript_44624:107-751(+)
ATGTTACTTGTAATTTTGTCTGGAATGTTTAGTATACTTATGGGAGGTGTTTTGAGAATTGCCTTGCAGCAAGGGAATAGATCGAGCTCTTCAGCTTGTGGGAGTGCCGATGTTTTGGAAGAATTGGGAGTTGCCCTTGAGTTAGAACCAGAGGGGATAAGAAGCTGTGTTAGTGAGGCTGGGATTGGTTTCATGATGGCTCCAATTTACCATCCTGCTATGAAGGTTGTCAGACCAGCAAGGAAAATCCTGAAAGTAAAAACAGTGTTCAACATTTTAGGCCCCATGTTGAATCCAGCTCGCATACCTTTTGCGGTGGTTGGGGTTTATACAGAAGATATTGTGCCTAAAATGGCTAAGGCACTTCAAAGGTTTGGCATGAAAAGAGCATTGGTGGTGCACTCAGAGGGATTGGATGAAATGAGCCCTTTGGGACCAGGATTTGTTCTTGATGTCACTCCAGAAAGAATAGAGAAGTTCACATTTGATCCCTTGGAATTTGGTATTGCTCGCTGCACCGTAAAAGATTTGCGAGGAGGTGGGCCAGAGTACAATGCTGAGGTATTGAAGCGTGTACTGTCAGGGGAGAGAGGATCCATAGCAGATGCATTTGTGTTAAATGCGGCAGCTGCTCTCTTGGTGTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44624.p1 GENE.R_Transcript_44624~~R_Transcript_44624.p1 ORF type:3prime_partial len:216 (+),score=53.75,Glycos_transf_3|PF00591.17|4e-67 R_Transcript_44624:107-751(+)
MLLVILSGMFSILMGGVLRIALQQGNRSSSSACGSADVLEELGVALELEPEGIRSCVSEAGIGFMMAPIYHPAMKVVRPARKILKVKTVFNILGPMLNPARIPFAVVGVYTEDIVPKMAKALQRFGMKRALVVHSEGLDEMSPLGPGFVLDVTPERIEKFTFDPLEFGIARCTVKDLRGGGPEYNAEVLKRVLSGERGSIADAFVLNAAAALLVS

Click here to download the sequence:
Link to NCBI Protein BLAST