Transcript Information: R_Transcript_44692.p1


Annotated TAIR IDAT2G40830.2
Annotated Gene NameRING-H2 finger C1A
Annotated Gene Symbol(s)RHC1A
Annotation TypeOrtholog
Chromosome Positionchr2:17043642-17044628 | Forward length=328
E-Value2.4E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.879499097989
Replicate 233.18980407421
Replicate 343.821584966552
Condition 2: 8 Hour
Replicate 137.489228009292
Replicate 243.680107695981
Replicate 342.222224703944
Condition 3: 24 Hour
Replicate 146.771184911099
Replicate 236.302134198776
Replicate 340.444671704049


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44692.p1 GENE.R_Transcript_44692~~R_Transcript_44692.p1 ORF type:complete len:322 (+),score=47.35,zf-RING_2|PF13639.2|2.8e+02,zf-RING_2|PF13639.2|1.5e-12,zinc_ribbon_9|PF14369.2|3.9e-11,zinc_ribbon_9|PF14369.2|27,zinc_ribbon_9|PF14369.2|2e+03,zf-RING_11|PF17123.1|1e-07,zf-RING_11|PF17123.1|7.7e+03,zf-rbx1|PF12678.3|5e+03,zf-rbx1|PF12678.3|2e-07,zf-C3HC4_2|PF13923.2|1e+03,zf-C3HC4_2|PF13923.2|5.3e-07 R_Transcript_44692:796-1761(+)
ATGTCTAGTGGTGGAAATACACACTGGTGTTATCAATGCAGGCTGCCAGTTCGACCTCGAAGCCGGGGTATGGTTTGCCCTCATTGCAATGGAGGTTTTGTTCAGGAGTTGGGGGAATTAGGTGGTGGTGTTGGTGGTGGGTATGCTCCCTATGGATTTCGGGATGGTCCTGATCAATTGTATGGAATTATGGAAGCTTTGGACTCTATGACGCTTCGTAATAACCCTGAACATCGATTCGGATTGATGGAAGCGTTGGATGCTTTTATAGGCCAAAGGAGGAGATATGGTGTGGAGGCGGAGCGCAGTCCTTGGTTGATTTTTCAAGGACAGTTACCTGGTAGGATGCCTAGGAGTGAACGGTTTGAGATGTTCTTTAATGGAGGACCGGGGATTGGGTTCAGTCGAGGCAATAATGGTGATTTATTTGTTGGGCCGGGTTTGCAGGAGTTGATAGAGCAGCTTATGACTGATCGACAGGGTCCACCACCCGCACCACGTTCTGCTATTGATGCAATGCCTACTGTCAAGATCACTCGTGCACATCTGCAGACTGATTCACATTGCCCTGTTTGTAAAGACCAATTCGAGTTGGGAACTGAAGTAAGACAGATGCCATGTAACCACATATATCACTCTGATTGTATTGTCCCTTGGTTGGTTCAGCACAATTCGTGCCCCGTTTGTCGCCATGTATTGGGCTCTAGCCCTCCCAGTCGCGGTCAAAGCTCGATGAGTGGAAACAGAAGTAGTTCTGGTAGCAGTAGAAGAGGCGGGGAAAGTAGTGATCAAAGCCAAGGCAGGAGGAATCCGTTCTCGTTCCTGTGGCCTTTCCGCTCATCCAACACTAGCAGCAGCCGAGAATACGCAGGAACTGGTTCTAGCAGCCCAGCAACAACTACAACAACTCACAATCACGGAGAGAATCATGAGATGAACTACTCTGGATGGCCTTTTGATTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44692.p1 GENE.R_Transcript_44692~~R_Transcript_44692.p1 ORF type:complete len:322 (+),score=47.35,zf-RING_2|PF13639.2|2.8e+02,zf-RING_2|PF13639.2|1.5e-12,zinc_ribbon_9|PF14369.2|3.9e-11,zinc_ribbon_9|PF14369.2|27,zinc_ribbon_9|PF14369.2|2e+03,zf-RING_11|PF17123.1|1e-07,zf-RING_11|PF17123.1|7.7e+03,zf-rbx1|PF12678.3|5e+03,zf-rbx1|PF12678.3|2e-07,zf-C3HC4_2|PF13923.2|1e+03,zf-C3HC4_2|PF13923.2|5.3e-07 R_Transcript_44692:796-1761(+)
MSSGGNTHWCYQCRLPVRPRSRGMVCPHCNGGFVQELGELGGGVGGGYAPYGFRDGPDQLYGIMEALDSMTLRNNPEHRFGLMEALDAFIGQRRRYGVEAERSPWLIFQGQLPGRMPRSERFEMFFNGGPGIGFSRGNNGDLFVGPGLQELIEQLMTDRQGPPPAPRSAIDAMPTVKITRAHLQTDSHCPVCKDQFELGTEVRQMPCNHIYHSDCIVPWLVQHNSCPVCRHVLGSSPPSRGQSSMSGNRSSSGSSRRGGESSDQSQGRRNPFSFLWPFRSSNTSSSREYAGTGSSSPATTTTTHNHGENHEMNYSGWPFDY*

Click here to download the sequence:
Link to NCBI Protein BLAST